DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and CG1571

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster


Alignment Length:526 Identity:107/526 - (20%)
Similarity:190/526 - (36%) Gaps:145/526 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 NFAESQKDGTKKEERKRGKREKKF--------RDKSAIAEQLNKKYLKCWQILERMINQNIYDD- 324
            ||.:.::   .:..||:.:||..:        |...::|||.|          ...|.||.:.| 
  Fly    86 NFNDEEQ---TQRHRKKVEREDSWGEQVLSMIRTTMSVAEQNN----------TLNIYQNFFADL 137

  Fly   325 ---IAHDYRYWEDPADEFREGEGNLL-PLWKFQYDKTKKMNVTDILFNPSYYDLFAVCFGSHDFM 385
               :.||.:.      .||....|:. .||      .....:..|.:.|:....|...:.:| |.
  Fly   138 PPELGHDIKM------RFRARVANVFHDLW------LPARQLRSIEWMPNNSRQFMTQYTNH-FA 189

  Fly   386 K-------------QTNEGYLCLFTVKNPSFP---------------------DYIIQTDCGVMC 416
            |             .||..|  ::.||||..|                     :.:..|..|.:|
  Fly   190 KGERLRPVTDEPFGGTNGFY--VWDVKNPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVC 252

  Fly   417 CDIHPTYPFLAVIGLYDGNVAVYNLREDCKEPLYVSRGVNCKHGECVWQIKWGLDMADGEVNFFS 481
                       :.|.:.|.:.:.|    |  ||.||      |.|....:.|....::.|  |:|
  Fly   253 -----------LWGTFKGGLPIRN----C--PLEVS------HRETTSALCWVHSKSNTE--FYS 292

  Fly   482 VSSDGRVFNWILMQNKLWVTTIITLYRENGLVD-GPDGTKVTLKSGG-SCMVFHPVDNKIFLVGT 544
            .|.||.:        |.|.|..:.:..:..|:: .|...:..:.|.| :.:.|.......|::|:
  Fly   293 GSLDGSI--------KYWDTRDLKMPMQELLLEPEPQERQSRMDSHGVTVLEFEYTIPVRFIIGS 349

  Fly   545 ECGYIY----KCSTAFSSKYLMTYYAHNMSVYR-IDFNRFNSNIFVSCGADWMVKVW-EDMRPDP 603
            :.|:::    |..|...:  |:.:|...:...| |:.|.|....|:..| ||..::| |:::..|
  Fly   350 DMGHVFVGNRKGMTPMET--LLAHYQLFVGPVRSINRNPFFVKNFLVTG-DWRARIWSEEVKDSP 411

  Fly   604 -LFIFDLGAAVGDVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYKAICIQAVVPKRKNKLTRLSFN 667
             ...|...|.:....|:....::|......|.|..:||.::..|.  |::|  ..|..:..|.|.
  Fly   412 STMYFRKNAQILCGAWSTGRCSLFVTGDINGVVDFWDLLLHHRKP--IRSV--DFKVAIADLVFR 472

  Fly   668 EKLAFIVVGDEKGVTTSLKLSPNLRMMVKPPK---------------------KQLYLDQNTLQI 711
            .:...:.:|.:.|.|..:.|..::|......|                     .::.|.:.|||:
  Fly   473 PEGDLLAIGLKNGDTHIMTLDESMRQATGKEKALMAAMFEREIVRCKLLEARYDEVRLKRKTLQM 537

  Fly   712 GKLEKL 717
            .:.|::
  Fly   538 AEEERV 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 81/416 (19%)
WD40 repeat 362..412 CDD:293791 15/83 (18%)
WD40 413..640 CDD:295369 51/235 (22%)
WD40 repeat 415..454 CDD:293791 9/38 (24%)
WD40 repeat 463..505 CDD:293791 10/41 (24%)
WD40 repeat 513..557 CDD:293791 9/49 (18%)
WD40 repeat 571..608 CDD:293791 11/39 (28%)
WD40 repeat 613..654 CDD:293791 8/40 (20%)
CG1571NP_572435.1 WD40 210..462 CDD:295369 62/291 (21%)
WD40 211..>488 CDD:225201 67/316 (21%)
WD40 repeat 229..269 CDD:293791 8/56 (14%)
WD40 repeat 277..325 CDD:293791 12/57 (21%)
WD40 repeat 332..369 CDD:293791 6/38 (16%)
WD40 repeat 379..415 CDD:293791 11/36 (31%)
WD40 repeat 422..447 CDD:293791 4/24 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435244
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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