DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and Dnai4

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001019957.1 Gene:Dnai4 / 313417 RGDID:1311027 Length:803 Species:Rattus norvegicus


Alignment Length:814 Identity:198/814 - (24%)
Similarity:320/814 - (39%) Gaps:202/814 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TDGPGGGGGDADDFDAWMKSRQL-----LKPDDQLDLTEAELGEEITKVLTPTNTNIVRNLVVYS 83
            |.|.|..|.:.....|   ||.:     :||.::|::..|:|    .:||.|...::        
  Rat    34 TGGKGYAGANQSKIVA---SRTMTFLPEMKPAEKLNIASAKL----VQVLDPRGVDV-------- 83

  Fly    84 FKEGEFVPAPL-----------PGNTVTLIAFAGNSLHVDSDEGRRQIEESDEIG---------Y 128
                  .|.||           |...:|            |.||..   .||.|.         .
  Rat    84 ------TPRPLYHPDPHAMPTKPSKLLT------------SQEGSM---GSDYISSYSLYQNTLN 127

  Fly   129 PLPMPNYT--VVEQRET---DNVDGEEGEGEEDDDGATAKD----------------AAVEDEDV 172
            |..:..||  |:....|   .::...|...|:.:|.:..:|                ||:..|::
  Rat   128 PSMLGQYTRSVIGSSSTVSKSSISTTESMTEDLEDPSYKRDRLASFADVRVMRAPAEAAITKEEL 192

  Fly   173 EEEDDEEAKGTEGDEGEGEGEGEGAAARQEDDEPAHQAAAVSSKKRKLINQ-FNY---C------ 227
            |...:.....||              ..:..|.|....:..|.:..|:|.: .||   |      
  Rat   193 ERNVEIFLMETE--------------TLRFFDLPTVMISTDSEEAEKVIEKNINYEILCRNRLGN 243

  Fly   228 ----ERGALTYTNPKRNVDTQTIPPPRSQFGANVLQWVIYDSYMENFAESQKDGTKKEERKRGK- 287
                ||...|:....:|.|.|.......:.|.....|.:|||:  |..|:.....:.....:.. 
  Rat   244 DLYVERMMQTFNGAPKNKDVQCDKIIMEEKGVMATTWDLYDSF--NIPEASLAAKRSAYLSKASL 306

  Fly   288 ----REKKFRDKSAIA----------------EQLNKKYLKCWQI------LERMINQNIYDDIA 326
                |:.|.:|..:.:                |..::|.||..::      :||::.:|::....
  Rat   307 LVRDRDPKIQDSESSSLMDIESVILAKSHEDEEDNSEKILKSDKLHQDLFYMERVLMENVFQPKL 371

  Fly   327 HDYR----YWE-DPA--------------DEFREGE--------------------GNLLPLWKF 352
            ..||    |.| :|.              ||.::.|                    .||..||.|
  Rat   372 AAYRQLPIYKELEPGQPEEDLQVVNKVTEDEVKKDEEEEMETELEIEITTEQSTIPANLERLWSF 436

  Fly   353 QYDKTKKMNVTDILFNPSYYDLFAVCFGSHDFMKQTNEGYLCLFTVKNPSFPDYIIQTDCGVMCC 417
            ..|.||.:||:.:.:|.:..||.||.:|:..| |:...|..|.:::|||.:|:.|.|:..||...
  Rat   437 SCDLTKGLNVSSLSWNKANSDLLAVGYGNFGF-KEQKRGMACCWSIKNPMWPERIYQSPYGVTSV 500

  Fly   418 DIHPTYPFLAVIGLYDGNVAVYNLREDCKEPLYVSRGVNCKHGECVWQIKW-----GLDMADGEV 477
            |...:.|.|..:|.::|.||:||::.:...|:..|.....||...|||::|     |....|...
  Rat   501 DFSISSPNLLAVGYHNGTVAIYNVQSNHNTPVLDSSESPQKHLGPVWQVQWIEQDRGTTGDDRRE 565

  Fly   478 NFFSVSSDGRVFNWILMQN-------KLWVTTIITLYRENGLVDGPDG-TKVTLKSGGSCMVFHP 534
            ...|:|:|||:..|::.:.       .|..||:.:  .:.|:.....| ..::.::.|.|..||.
  Rat   566 ILVSISADGRISKWVIRKGLDCHDLMHLKRTTVTS--SKKGIEKEKKGEALISRQAPGMCFAFHT 628

  Fly   535 VDNKIFLVGTECGYIYKCSTAFSSKYLMTYYAHNMSVYRIDFNRFNSNIFVSCGADWMVKVWEDM 599
            .|..|:|.|||.|.|:|||.:::.:||.||..|...||::.:|.|..::|:||.|||.|.:|...
  Rat   629 KDTNIYLAGTEEGLIHKCSCSYNEQYLETYRGHKGPVYKVTWNPFCPDVFLSCSADWGVMIWHQD 693

  Fly   600 RPDPLFIF-DLGAAVGDVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYKAICIQAVVPKRKNKLTR 663
            ...|.|.| .....|.||.|:|.|:.:||| ..|.:|.::||.::....:.:....|  ..|.|.
  Rat   694 NVKPFFTFYPTTYVVYDVAWSPKSAYIFAA-ANENRVEIWDLQISTLDPLIVNVANP--GIKFTT 755

  Fly   664 LSFNEKLAFIVVGDEKGVTTSLKLSPNLRMMVKP 697
            :.|.::...::|||..|.....:    ||.|..|
  Rat   756 VLFAKQTDCLLVGDSDGQVAVYE----LRNMPTP 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 113/359 (31%)
WD40 repeat 362..412 CDD:293791 17/49 (35%)
WD40 413..640 CDD:295369 78/240 (33%)
WD40 repeat 415..454 CDD:293791 11/38 (29%)
WD40 repeat 463..505 CDD:293791 15/53 (28%)
WD40 repeat 513..557 CDD:293791 16/44 (36%)
WD40 repeat 571..608 CDD:293791 15/37 (41%)
WD40 repeat 613..654 CDD:293791 13/40 (33%)
Dnai4NP_001019957.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 3/6 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..109 4/32 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..163 3/19 (16%)
WD40 <443..781 CDD:225201 107/347 (31%)
WD40 repeat 447..492 CDD:293791 15/45 (33%)
WD 1. /evidence=ECO:0000255 492..532 12/39 (31%)
WD40 496..778 CDD:295369 88/286 (31%)
WD40 repeat 497..541 CDD:293791 12/43 (28%)
WD 2. /evidence=ECO:0000255 541..589 14/47 (30%)
WD40 repeat 547..616 CDD:293791 16/70 (23%)
WD 3. /evidence=ECO:0000255 616..656 16/39 (41%)
WD40 repeat 621..659 CDD:293791 18/37 (49%)
WD 4. /evidence=ECO:0000255 660..700 14/39 (36%)
WD40 repeat 666..701 CDD:293791 13/34 (38%)
WD 5. /evidence=ECO:0000255 703..742 13/39 (33%)
WD40 repeat 708..740 CDD:293791 13/32 (41%)
WD 6. /evidence=ECO:0000255 748..787 12/44 (27%)
WD40 repeat 750..779 CDD:293791 7/32 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D310818at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44552
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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