DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and Dync2i1

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_006515843.1 Gene:Dync2i1 / 217935 MGIID:2445085 Length:1033 Species:Mus musculus


Alignment Length:766 Identity:151/766 - (19%)
Similarity:258/766 - (33%) Gaps:264/766 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 LHVDSDEGRRQIEESDEIGYPLPMPNYTVVEQRETDNVDGEEGEGEEDDDGATAKD---AAVEDE 170
            ||.| ||.||...:..|..           .:.|....:.:|.|.|::|..||..|   ..:||:
Mouse   303 LHYD-DERRRSHADKKERS-----------SKEEHKKRELKELEKEDNDLEATGPDEYLPNLEDD 355

  Fly   171 DVEEEDDEEAKGTEGDEGEGEGEGEGAAARQEDDEPAHQ-------AAAVSSKKRKL----INQF 224
            .|:.|||.|.     .:|:.:...|..|..:.::.|..|       ..|:|::..::    :..|
Mouse   356 FVDYEDDFEV-----CDGDDDSNNEHEAREKAEELPLAQKREIQEIQKAISAENERVGELSLKMF 415

  Fly   225 NYCERGALTYT---------NPKRN------VDTQTI---PPPRSQF------GANVLQWV---- 261
            .  ::|...||         :|.|.      ||..|.   ...|||.      .:.:|:.:    
Mouse   416 Q--KQGWTEYTKEPWTDANDSPSRTPVCGIFVDFATASHRQKSRSQALKQKTRSSKLLRLIDLDF 478

  Fly   262 -------------IYDSYMENFAESQKDGTKK-------------------EERK---------- 284
                         .||.|:.||.   |..||:                   |.|:          
Mouse   479 SFTFSLLDLPPVNEYDMYIRNFG---KKNTKQAYVQYNEDNVERDIQTEDIETREVWTQHPGEGT 540

  Fly   285 ---RGKREKKFRDKSAIAE----QLNKKYLKCWQILERMINQNIYDDIAHDYRYWEDPADEFREG 342
               .|..||.|.|.:.:.:    :|........|::..::.:                 |....|
Mouse   541 AVSGGSEEKDFSDVTVVPKIDTPRLANFLRAACQVVAVLLEE-----------------DRLAAG 588

  Fly   343 EGNLLPLWKFQYDKTKKMNVTDILFN-----PSYYDLFAVCFGSHDFMKQT-------------- 388
                 |.| ....:.|.:|::|....     |........|..:....:||              
Mouse   589 -----PSW-IPRAQDKALNISDSSSQLNTSLPFLQSRKVSCLHASRVQRQTVVSVHDLPEKAFAP 647

  Fly   389 ---NEGYLCLFTVKNPSFPDYIIQTDCGVMCCDIHPTYPFLAVIGLYDGNVAVYNLREDCKEPLY 450
               :...||::.:..||.|..::..:..|.||...|...||...|...|:|.|::||||.:...|
Mouse   648 SLDSRHLLCVWDIWQPSGPQKVLICESKVTCCCFSPLKAFLLFAGTVHGSVVVWDLREDSRIHHY 712

  Fly   451 VSRGVNCKHGECVWQIKWGLDMADG---EVNF--------------------------------- 479
            |      :...|.|..:......||   .||.                                 
Mouse   713 V------RLSNCFWAFRTPTFSTDGILTSVNHRSPLQAIEPVATSAYKKQSFVLSPFSTQEEMAG 771

  Fly   480 --FSVSS--DGRVFN-WILMQ--------------------NKLWVTTIITL-----YRENGLVD 514
              |.::|  :..|.| |::::                    .||..:|:|.|     ::::.|. 
Mouse   772 LSFHIASLDETGVLNVWVVVELPKADISGSMSDLGLIPGGRIKLVHSTVIQLGNSLSHKDSELW- 835

  Fly   515 GPDGTKVTLKSGGSCMVFHPVDNKIFLVGTECGYI-------YKCS-TAFSSKYLMTYYAHNMSV 571
               |:..||.     :.|.|.|...|:|||:.|.|       ::.| ..|..:   .:....:.|
Mouse   836 ---GSTQTLS-----VKFLPSDPNHFVVGTDMGLISHSTRQDWRVSPRVFKPE---QHGVRPIKV 889

  Fly   572 YRIDFNRFNSNIFVSCGADWMVKVWEDMRPDPLFIFD---LGAAVGDVKWAPYSSTVFAAVTTEG 633
            ..|||:.|...:|::..:|..:::.:.....|:..:|   .|.||..::|:|....||.......
Mouse   890 NVIDFSPFEETVFLAGCSDGSIRLHQLTSERPIMQWDNSTSGHAVTSLQWSPTRPAVFLVQDDAS 954

  Fly   634 KVHVFDLNVNKYKAICIQAVVPKRKNKLTRLSFNEKLAFIVVGDEKGVTTS 684
            :::|:||..|....:..|.:.|   :||        :|..:||:.:..:.|
Mouse   955 RIYVWDLLENDLGPVAQQPISP---DKL--------VAMTIVGEPEKTSGS 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 87/431 (20%)
WD40 repeat 362..412 CDD:293791 10/71 (14%)
WD40 413..640 CDD:295369 64/303 (21%)
WD40 repeat 415..454 CDD:293791 15/38 (39%)
WD40 repeat 463..505 CDD:293791 13/102 (13%)
WD40 repeat 513..557 CDD:293791 13/51 (25%)
WD40 repeat 571..608 CDD:293791 8/36 (22%)
WD40 repeat 613..654 CDD:293791 10/40 (25%)
Dync2i1XP_006515843.1 PTZ00121 <48..396 CDD:173412 28/109 (26%)
WD40 604..1000 CDD:225201 85/420 (20%)
WD40 repeat 635..671 CDD:293791 5/35 (14%)
WD40 repeat 676..708 CDD:293791 14/31 (45%)
WD40 repeat 715..752 CDD:293791 6/36 (17%)
WD40 repeat 759..788 CDD:293791 4/28 (14%)
WD40 repeat 842..878 CDD:293791 10/40 (25%)
WD40 repeat 890..926 CDD:293791 7/35 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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