DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and dyci-1

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001370459.1 Gene:dyci-1 / 177440 WormBaseID:WBGene00015927 Length:643 Species:Caenorhabditis elegans


Alignment Length:713 Identity:157/713 - (22%)
Similarity:273/713 - (38%) Gaps:184/713 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QVKGKLR-TSKNKTDGPGGGGGDADDFDAWMKSRQLLKPDDQLD-LTEAELGEEITKVLTPTNTN 74
            :|:..|| |::|.|...|             .|||.|..::..| |.:..:..|      ||   
 Worm    30 RVQNLLRSTNENGTTQNG-------------TSRQTLSSNEVEDILRQVGISTE------PT--- 72

  Fly    75 IVRNLVVYSFKEGEFVPAPLPGNTVTLIAFAGNSLHVDSDEGRRQIEESDEIGYPLPMPNYTVVE 139
             ||          |..|||.||        :.:..|||......:|  |:.:...|   .::.|:
 Worm    73 -VR----------EESPAPPPG--------SHSDNHVDPSASHPRI--SNLLSVDL---EFSSVQ 113

  Fly   140 QRETDNVDG---EEGEGEEDDDGATAKDAAVEDEDVEEEDDEEAKGTEGDEGEGEGEGEGAAARQ 201
            ...|||.|.   .:|. :.||:..:..:.::..::.:.:||....       ...|:..|.|...
 Worm   114 TACTDNKDSAIYSKGT-QTDDERISVGEFSLGSQEFDYDDDMIMP-------MDHGQFRGRAHSH 170

  Fly   202 EDDEPAHQAAAVSSKKRKLINQFNYCERGALTYTNPKRNVDTQTIPPPRSQFGANVLQWVIYDSY 266
            :.|.|......::    ||:.|....::|.......::...|..|.||.|.              
 Worm   171 DQDSPLPYNEEIA----KLLGQTKQGDKGLTRQETEEKKTQTVQIVPPLSD-------------- 217

  Fly   267 MENFAESQKDGTKKEERKRGKREKKFRDKSAIAEQLNKKYLKCWQILERMINQNIYDDIAHDYRY 331
                          ||:.|...:.:|.|          .:.:..:::.|.:|:.|  ||.  ..|
 Worm   218 --------------EEKYRLTLDPEFLD----------SFNRSCKVISRALNEEI--DIC--INY 254

  Fly   332 WEDPADEFREGEGNLLPLWKFQYDK--TKKMNVTDILFNPSYYDLFAVCFGSHDFMKQTNE--GY 392
            .:||.::....: :||.|.:...|:  |.|..||.:.|:..|.||.||.:|..|.   .||  |.
 Worm   255 TKDPYEKAIASD-DLLHLAQVYQDETWTAKRLVTGMAFSEHYPDLLAVSYGPCDI---PNEPPGV 315

  Fly   393 LCLFTVKNPSF-PDYIIQTDCGVMCCDIHPTYPFLAVIGLYDGNVAVYNLREDCKEPLYVSRG-- 454
            :.::..|:... .::|:.....:........:..|.:.|...|.:.|::.|...:: |.::|.  
 Worm   316 IVVWNTKSKRMTAEFIVYCQSEIQSVAFARFHAHLLLAGCESGQICVWDNRLTSRK-LPINRSPL 379

  Fly   455 --------VNC------KHGECVWQIKWGLDMADGEVNFFSVSSDGRVFNWILMQNKLWVTTIIT 505
                    |:|      |:..                ||.|:|.|||:.:|              
 Worm   380 TTQAHTYTVSCLAVVGTKNAH----------------NFVSLSRDGRICSW-------------- 414

  Fly   506 LYRENGLVDGPDGTKVTLKSGGSC----MVFHPVDNKIFLVGTECGYIYKCSTAFSS----KYLM 562
              ..:.|....||.::..|.|.:.    |.|...:.:.|:|||:.|.|...|...:.    |..:
 Worm   415 --NVDNLTQPVDGKELMTKEGKAASATRMSFPIGEMQTFVVGTDTGEILAASRNGADPAVIKTDV 477

  Fly   563 TYYAHNMSVYRIDFNRFN-----SNIFVSCGADWMVKVWEDMRPDPLFIF----DLGAAVGDVKW 618
            .|..|:.::..|:|:|.:     |::|:|...||.||:|.....:..|.|    ||   |.||.|
 Worm   478 CYKGHSGTLTGIEFHRASGVVDFSHLFISSSHDWTVKLWSTKDANLKFSFESHPDL---VLDVAW 539

  Fly   619 APYSSTVFAAVTTEGKVHVFDLNVNKYKAIC-IQAVVPKRKNKLTRLSFNEKLAFIVVGDEKG 680
            :|....|||::..:|.:.|::||.:....:. ::|........:.||.::.....:.|||::|
 Worm   540 SPVHPAVFASIDADGNIFVWNLNEDVEGPVARLRAGAEGESVYMNRLIWSPDGKHVFVGDDEG 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 87/367 (24%)
WD40 repeat 362..412 CDD:293791 15/52 (29%)
WD40 413..640 CDD:295369 60/259 (23%)
WD40 repeat 415..454 CDD:293791 6/38 (16%)
WD40 repeat 463..505 CDD:293791 8/41 (20%)
WD40 repeat 513..557 CDD:293791 13/47 (28%)
WD40 repeat 571..608 CDD:293791 13/45 (29%)
WD40 repeat 613..654 CDD:293791 13/41 (32%)
dyci-1NP_001370459.1 WD40 repeat 286..333 CDD:293791 15/49 (31%)
WD40 repeat 339..383 CDD:293791 7/44 (16%)
WD40 382..>611 CDD:421866 62/256 (24%)
WD40 repeat 388..457 CDD:293791 22/100 (22%)
WD40 repeat 487..528 CDD:293791 12/40 (30%)
WD40 repeat 534..573 CDD:293791 12/38 (32%)
WD40 repeat 581..609 CDD:293791 6/22 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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