DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and dnai2b

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_005156459.1 Gene:dnai2b / 101884977 ZFINID:ZDB-GENE-131016-1 Length:604 Species:Danio rerio


Alignment Length:543 Identity:122/543 - (22%)
Similarity:226/543 - (41%) Gaps:73/543 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 VSSKKR-KLINQFNYCERGALTYTNPKRNVDTQTIPPPRSQFGANVLQWVIYD------SYMENF 270
            |.:||| :...|.|:.:|.|      :.:||..    |.|...||   :.:.|      ...:..
Zfish     6 VYTKKRSEFGRQCNFSDRPA------ELHVDIL----PDSSLAAN---FTVRDPCNVTIQCADEM 57

  Fly   271 AESQKDGTKKEERKRG-----------------KREKKFRDKSAIAEQLNKKYLKCWQILERMIN 318
            :|.:.:..:.|...||                 :...::|.|....|......::...::|..|.
Zfish    58 SEHEVNTERFESESRGINHVEGGWPKDLNPDDMEATIRYRKKVEKDEHYQNTIMQIAGLMEHCIR 122

  Fly   319 QNIYDDIAHDYRYWEDPAD-EFREGEGNLLPLWKFQYDKTKKMNVTDILFNPSYYDLFAVCFGSH 382
            ||...||..|:...||..| |..|.:.:...:..|:.....|...|.:.::|......||.:.|.
Zfish   123 QNNATDIYEDFLEDEDEEDVEESEEQPSAKTINVFRDPNEVKRTATSLSWHPDGNHKLAVAYSSL 187

  Fly   383 DFMKQTN----EGYLCLFTVKNPSFPDYIIQTDCGVMCCDIHPTYPFLAVIGLYDGNVAVYNLRE 443
            :|.:..|    :.|  ::.::||:.|:..::..|.::|.:.:|....:.:.|.|:|.:|.::.|:
Zfish   188 EFQRAPNDMNFDSY--IWDIENPNKPEMTLKPVCPLVCLEYNPKDSHILIGGSYNGQIAYWDTRK 250

  Fly   444 DCKEPLYVSRGVNCKHGECVWQIKWGLDMADGEVNFFSVSSDGRVFNWILMQNKLWVTTIITLYR 508
            . .:|:.:| .:...|.:.|::..| |....| .:.||.|:||:|..|.:.:.......::....
Zfish   251 G-SQPVEMS-PIEFSHRDPVYKAIW-LQSKTG-TDIFSASTDGQVLWWDIRKMSEPTERLVMDPT 311

  Fly   509 ENGLVDGPDGTKVTLKSGGSCMVFHPVDNKIFLVGTECGYIYKCSTAF---SSKYLMTYYAHNMS 570
            :.|.:|.        ..|...:.|.......|:||||.|.:..|:...   :.|.:.||..|:..
Zfish   312 KKGNIDN--------SLGAISLEFETTMPTKFMVGTEQGLVVSCNRKAKTPAEKIVCTYSGHHGP 368

  Fly   571 VYRIDFNRFNSNIFVSCGADWMVKVW-EDMRPDPLFIFDLGAA-VGDVKWAPYSSTVFAAVTTEG 633
            ||.:..|.|....|::.| ||..::| ||::...:.......| :.|..|:|...:||..|..:|
Zfish   369 VYALQRNPFFPKNFLTVG-DWTARIWSEDIKESSIMWTKYHIAHLLDGCWSPVRPSVFFTVKMDG 432

  Fly   634 KVHVFDLNVNKY-KAICIQAVVPKRKNKLTRLSFNEKLAFIVVGDEKGVTTSLKLSPNLRMMVKP 697
            .:.|:|:...:. ..:|::..    ...|..:...:...|:..|.:.|.||.|::|..|..:.|.
Zfish   433 TLDVWDILFKQNDPTLCLKVC----DEALYSIKVQDNGRFLACGSQLGTTTLLEISSGLCSLQKN 493

  Fly   698 PKKQL--YLDQNTLQIGKLEKLL 718
            .|..:  ..::.|    |.||:|
Zfish   494 EKALVSEMFERET----KREKIL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 82/364 (23%)
WD40 repeat 362..412 CDD:293791 11/53 (21%)
WD40 413..640 CDD:295369 56/231 (24%)
WD40 repeat 415..454 CDD:293791 9/38 (24%)
WD40 repeat 463..505 CDD:293791 11/41 (27%)
WD40 repeat 513..557 CDD:293791 10/46 (22%)
WD40 repeat 571..608 CDD:293791 11/37 (30%)
WD40 repeat 613..654 CDD:293791 10/41 (24%)
dnai2bXP_005156459.1 WD40 <168..495 CDD:225201 80/345 (23%)
WD40 repeat 169..215 CDD:293791 10/47 (21%)
WD40 repeat 221..260 CDD:293791 9/40 (23%)
WD40 223..477 CDD:295369 61/270 (23%)
WD40 repeat 268..296 CDD:293791 11/29 (38%)
WD40 repeat 318..354 CDD:293791 9/43 (21%)
WD40 repeat 369..409 CDD:293791 11/40 (28%)
GBP_C <489..588 CDD:303769 7/28 (25%)
coiled coil 567..578 CDD:293879
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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