DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and dnai3

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_017209145.2 Gene:dnai3 / 100333131 ZFINID:ZDB-GENE-121116-5 Length:968 Species:Danio rerio


Alignment Length:674 Identity:119/674 - (17%)
Similarity:215/674 - (31%) Gaps:227/674 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 ATAKDAAVEDEDVEEEDDE-EAKGTEGDEGEGEGEGEGAAARQEDDEPAHQAAAVSSK---KRKL 220
            |...|..:|||:.:||::| ..|..|.......|          .:...:..:||.|.   .|:|
Zfish   139 AEGADEQMEDEEQQEEEEEMMTKTPEPQPWVSLG----------SERLVYTPSAVLSSVICVRQL 193

  Fly   221 INQFNYCERGALTYTNPKRNVDTQTIPPPRSQFG-ANVLQW----VIYDSY---------MENFA 271
              :::.|..|..:.|              |.:|. .|.|.|    |...||         ||..:
Zfish   194 --RYSVCPLGRRSGT--------------RVRFSDRNALDWKEELVECSSYEDKSFSITRMERDS 242

  Fly   272 ESQ--KDGT--------KK--------EERKRGKREKKFRDKSAIAEQLNKKYLKCWQILERMIN 318
            .:|  :|.|        ||        |.|:....||:.:.:|   |.|........:..|..:.
Zfish   243 STQTCRDNTHTCTQTLWKKPKNMWSQYEPREFSSEEKQHQLQS---ENLKNFITSVARRFEIYLQ 304

  Fly   319 QNIYDDIAHDYRYW----EDPADEFREGEGNLLPLWKF-QYDKTKKMNVTDILFNPSYYDLFAVC 378
            ||:..|:..|  .|    ||.|....:.|..|.....| ....:|:..::.:.::||...:..|.
Zfish   305 QNLIADVFCD--DWTALCEDDASLMGKTETQLKEYQSFMDLHFSKEKTISHVQWHPSISGVIVVS 367

  Fly   379 FGSHDFMKQ---------TNEGYLCLFTVKNPSFPDYIIQTDC--GVMCCDIHPTYPFLAVIGLY 432
            ......:::         .|..::..::..:|..|.  :|.:|  .|:|....|:...:...|..
Zfish   368 MMERLSLEERIDSSTKLLLNPSHILFWSFSDPINPQ--LQLECPDDVLCFQFSPSDHNIIAGGCM 430

  Fly   433 DGNVAVYNL----------REDCKEPL-------------YVS-RGVNCKHGECVWQIKW----- 468
            :|.|.::::          |...|..|             |.: .|:...|...:..|:|     
Zfish   431 NGQVVLWDISAHVDRLQDTRSGGKNILNKLGKSDATPVVRYCAVSGIENGHKAPITDIQWLPETF 495

  Fly   469 -----GL---DMADGEVNFFSVSSDGRVFNWILMQNKLWV--TTIITLYRENGLVDGPDGT---- 519
                 |.   :.:...|...:.:.|..|..|.|...::.|  .|.|...:|...::.|.|.    
Zfish   496 EVNKLGTPVENQSRTSVQLVTCAPDCCVLFWDLRAPRVMVHSLTDIKQKQEEKPLENPHGVPNTF 560

  Fly   520 -----------KVTLK-----------------------------SGGSCMVF-----------H 533
                       :|:|.                             ||....||           .
Zfish   561 THLNLTWKPFIRVSLPKISSSGEYSPLRFSMRENTVDYNTGDKSVSGADSRVFAQLRMQSAKQQK 625

  Fly   534 PVDN---KIFLVGTECGYIY---------KCSTAFSSKYLMTYYAHNMSVYRIDFNRFNSNIFVS 586
            |:.|   |:::...:...:|         ......|:|.|..:...:..::.:..:.|..:|.::
Zfish   626 PLQNISTKLYIATEDGELVYTDWKVEKDNDSGRMLSAKPLDVFLLQDTLLHTVSRSPFFRDIILT 690

  Fly   587 CGADWMVKVWEDMRPDPLFIFDLGAAVGDVKWAPYSSTVFAA-------------VTTEGKVHVF 638
            .|. :...:|.:           |...|.:..:.||.::|:|             ...:|.|.|:
Zfish   691 VGR-FSFSIWRE-----------GLTCGPLLMSVYSKSMFSAGHWSRSRPAVLFMGREDGDVEVW 743

  Fly   639 DL-----------NVNKYKAICIQ 651
            ||           |::.....||:
Zfish   744 DLLQNSRQPSHTQNISTAAISCIR 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 66/440 (15%)
WD40 repeat 362..412 CDD:293791 7/58 (12%)
WD40 413..640 CDD:295369 52/345 (15%)
WD40 repeat 415..454 CDD:293791 9/62 (15%)
WD40 repeat 463..505 CDD:293791 10/56 (18%)
WD40 repeat 513..557 CDD:293791 12/110 (11%)
WD40 repeat 571..608 CDD:293791 4/36 (11%)
WD40 repeat 613..654 CDD:293791 13/63 (21%)
dnai3XP_017209145.2 WD40 <348..>533 CDD:225201 28/186 (15%)
SbcC <835..>953 CDD:223496
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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