DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9313 and dync2i1

DIOPT Version :10

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_073764942.1 Gene:dync2i1 / 100330581 ZFINID:ZDB-GENE-140821-1 Length:1065 Species:Danio rerio


Alignment Length:730 Identity:135/730 - (18%)
Similarity:249/730 - (34%) Gaps:228/730 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 QIEESDEIGYPLPMPNYTVVEQRETDNVDGEEGEGEEDDDGATAKDAAVED-----EDVEEEDDE 178
            |.|.||        |..: ||..||:    ::.|..:||.....:|  .||     |||:|::|:
Zfish   331 QAETSD--------PEVS-VENEETE----QDKESSKDDRNHYEED--FEDYEEDFEDVDEDEDD 380

  Fly   179 EAKGTEGDEGEG---EGEGEGAAARQED--------DEPAHQAAAVSSK---------KRKLINQ 223
            :|:..|.:|.|.   |.:.|.:..|:::        ||...:..:..||         :|..::.
Zfish   381 KAEEDEKEEHENKAREDKRELSPRRRQEIEAIQRAMDEENERIYSARSKPSTADSTVTQRDRLSN 445

  Fly   224 FNYCERGALTYTNPKRNVDTQTIPPPRSQFGANVLQWV-----------------IYDSYMENF- 270
            .|......:.:.:.|:...:|.:...:.:....:|:.:                 .||.|::|| 
Zfish   446 ANQTRGTIIDFVSAKQREISQKVARKQKKRSEELLRLIDLDFSITFSMLDLPPVNEYDMYIKNFG 510

  Fly   271 --------AESQKDGTKKEERKRGKREKKFRDK-----------------------------SAI 298
                    .:..:|.|   :|.....:.:..||                             |..
Zfish   511 TANTKQAYVQCNEDST---DRDIQTEDVEMTDKWTQHPPEAKSACGGSTGTQANAVESIARTSTD 572

  Fly   299 AEQLNKKYLKCWQILERMINQNIYDDIAHDYRYWEDPADEFREG-----------EGNLLPLWKF 352
            :::|........|::..::.:|:....:......:..|..|.:|           .|..:.|  .
Zfish   573 SKRLTTFLRSAAQVMAVLVEENMAQSNSVKKLCSKTDALSFSDGCIQLNTKLPFLNGRQVSL--L 635

  Fly   353 QYDKTKKMNVTDILFNPSYYDLFAVCFGSHDFMKQTNEGYLCLFTVKNPSFPDYIIQTDCGVMCC 417
            |:.:.::..:..: ..||         ..:..::..:|..:|::.:..||.|..|:..:..|.||
Zfish   636 QFSQVQRQTLLSV-HPPS---------SKNSSVRLDSETVVCVWNIWEPSRPQKILLYESEVKCC 690

  Fly   418 DIHPTYPFLAVIGLYDGNVAVYNLREDCKEPLYVSRGVNCKHGECVWQIKW---GLDMADGEVNF 479
            ...|....|...|...|:|.|::|||      :.....|.:.|:.||.:::   ..|.....|..
Zfish   691 CFSPGKVTLVFAGTAVGSVIVWDLRE------HSGSHSNLEIGKEVWTLRYPTFSTDAVLSGVGH 749

  Fly   480 FS---------VSSD---------------GRVF-------NWILMQNKLWVTTIITLYRENGLV 513
            .|         .|:|               |..|       |.:|   .|||  :|.|.:.|   
Zfish   750 LSPVVSIEPVIASADMSSTSTLTADIEECMGLSFQLGSLDENGVL---TLWV--VIELPKGN--- 806

  Fly   514 DGPDGTKVT----------------LKSGGSCMVFH----------------------------- 533
            |....|.:.                |:.||...:.|                             
Zfish   807 DSGSQTDLVPLDLHHASNAVSILLGLRPGGKVKLLHSSSLQTTERLPKDTIMGFGPSVSLQLKFL 871

  Fly   534 PVDNKIFLVGTECGYIYKCSTAFSSKYLMTYYAHNMSVYR------IDFNRFNSNIFVSCGADWM 592
            |.|:..:.:||..|.: :..|..|.|.|...|......||      :||:......|:...:|..
Zfish   872 PSDSNHYFIGTNMGLV-RHGTRHSLKVLPKVYRSQSDSYRPVEVTALDFSPLGEPFFLIGCSDGS 935

  Fly   593 VKVWEDMRPDPLFIF---DLGAAVGDVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYKAICIQAVV 654
            |::...:|.|||..:   ..||.:..|:|:.....||..:.....:|::||....|..:..:.: 
Zfish   936 VRLHSVLREDPLMEWAGRSSGAPILSVQWSQTRPAVFCVLDAASDLHIWDLTEKDYVPVITENI- 999

  Fly   655 PKRKNKLTRLS-FNE 668
              ..:::|.:: |.|
Zfish  1000 --HSDRVTAMAVFGE 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 repeat 362..412 CDD:293791 8/49 (16%)
WD40 413..640 CDD:475233 65/314 (21%)
WD40 repeat 415..454 CDD:293791 11/38 (29%)
WD40 repeat 463..505 CDD:293791 14/75 (19%)
WD40 repeat 513..557 CDD:293791 12/88 (14%)
WD40 repeat 571..608 CDD:293791 11/45 (24%)
WD40 repeat 613..654 CDD:293791 8/40 (20%)
dync2i1XP_073764942.1 None

Return to query results.
Submit another query.