DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9313 and dnai1

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_031750048.1 Gene:dnai1 / 100144946 XenbaseID:XB-GENE-6455855 Length:703 Species:Xenopus tropicalis


Alignment Length:749 Identity:321/749 - (42%)
Similarity:430/749 - (57%) Gaps:93/749 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KPGKGDGKQVKGKLRTSKNKTDGPGGGGGDADDFDAWMKSRQLLKPDDQLDLTEAELGEEITKVL 68
            ||.|.          .||.|.|......||.  .:.|.:::.|:||.|||:||||||.||.|::|
 Frog    22 KPSKA----------ASKKKDDDDSTDVGDG--VEEWTQAKTLIKPRDQLELTEAELNEEFTRIL 74

  Fly    69 TPTNTNIVRNLVVYSFKEGEFVPAPLPGNTVTLIAFAGNSLHVDSDEGRRQ------IEESDEIG 127
            |..|.:..:|:|.|||||..:....:........:..||.||.||||.|||      :|....|.
 Frog    75 TANNPHAPQNIVRYSFKERAYKAVSMVEQLAVHFSLDGNLLHKDSDEARRQKLRMGGLEGPTHID 139

  Fly   128 YPLPMPNYTVVEQRETDNVDGEEGEGEEDDDGATAKDAAVEDEDVEEEDDEEAKGTEGDEGEGEG 192
            .|...|         .||::.||..|       |...||               |.||.:||   
 Frog   140 SPAAEP---------ADNMETEEHPG-------TPVPAA---------------GDEGADGE--- 170

  Fly   193 EGEGAAARQEDDEPAHQAAAVSSKKRKLINQFNYCERGALTYTNPKRNVDTQTIPPPRSQFGANV 257
                       |.|       ..|:|||.||||:.||.:.:..||.|....||.||||..|.|:.
 Frog   171 -----------DAP-------KLKERKLTNQFNFSERASQSLNNPLRERACQTEPPPREVFSASA 217

  Fly   258 LQWVIYDSYMENFAESQK-------DGTKKEE-----RKRGKREKKFRDKSAIAEQLNKKYLKCW 310
            .||.|||:|:|...:.||       ..:||||     |:.|..|.:..|.|.:|        |..
 Frog   218 NQWEIYDAYVEELKKQQKLKEKPKAPASKKEEETPSRRRMGATESQSDDISKLA--------KSC 274

  Fly   311 QILERMINQNIYDDIAHDYRYWEDPADEFREGEGNLLPLWKFQYDKTKKMNVTDILFNPSYYDLF 375
            :|:|||:|||.:||:..|::|:||||||||..||.|:||||||.::.|.:.||.:.:||:|.|||
 Frog   275 KIMERMVNQNSFDDVTQDFKYFEDPADEFRGQEGTLMPLWKFQQEQAKGLAVTALCWNPNYKDLF 339

  Fly   376 AVCFGSHDFMKQTNEGYLCLFTVKNPSFPDYIIQTDCGVMCCDIHPTYPFLAVIGLYDGNVAVYN 440
            ||..||:||||| |.|.:..:::||||||:|:...|.||||.|:|..:|:|...|.||||||:||
 Frog   340 AVAHGSYDFMKQ-NRGLVLFYSLKNPSFPEYLFSADSGVMCLDLHRDHPYLVAAGFYDGNVAIYN 403

  Fly   441 LREDCKEPLYVSRGVNCKHGECVWQIKWGLDMADGEVNFFSVSSDGRVFNWILMQNKLWVTTIIT 505
            |:.|..:|.::|...:.||.:.|||:||..|..|...|||||||||||.:|.|::::|..:.:|.
 Frog   404 LKADTPQPSFISSAKSGKHTDPVWQVKWQRDDMDNNPNFFSVSSDGRVVSWTLVKDELVHSDVIK 468

  Fly   506 LYRENGLVDGPDGTKVTLKSGGSCMVFHPVDNKIFLVGTECGYIYKCSTAFSSKYLMTYYAHNMS 570
            |........||:|.::.:...|:...||.....::|||||.|.|:|||.|:|||:|.||.||:|:
 Frog   469 LSFSGTTASGPEGLRLHIHGSGTAFDFHWQTEYLYLVGTEEGNIHKCSKAYSSKFLDTYEAHSMA 533

  Fly   571 VYRIDFNRFNSNIFVSCGADWMVKVWEDMRPDPLFIFDLGAAVGDVKWAPYSSTVFAAVTTEGKV 635
            |..:.:|.|:..:|:||.:||.||:|:.....|:|:|||.|.|.||.|||||||||||||.:|||
 Frog   534 VDTVRWNPFHPKVFISCSSDWTVKIWQHDVKSPMFVFDLSAPVADVAWAPYSSTVFAAVTVDGKV 598

  Fly   636 HVFDLNVNKYKAICIQAVVPKRKNKLTRLSFNEKLAFIVVGDEKGVTTSLKLSPNLRMMVKPPKK 700
            |||||:||||:|:|.|.||.|:|.|||.:.||.....::|||::|..||||||||||.|.|..|.
 Frog   599 HVFDLSVNKYEALCQQPVVAKKKTKLTHVEFNPVYPILIVGDDRGYVTSLKLSPNLRKMPKEKKG 663

  Fly   701 QLYLDQNTLQIGKLEKLLSLVRE--LPEGSTAVP 732
            |.......:::.||:|||:||||  :.:|.|..|
 Frog   664 QEAQKGPEVEVAKLDKLLALVREPDIQQGETESP 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 176/352 (50%)
WD40 repeat 362..412 CDD:293791 26/49 (53%)
WD40 413..640 CDD:295369 111/226 (49%)
WD40 repeat 415..454 CDD:293791 19/38 (50%)
WD40 repeat 463..505 CDD:293791 21/41 (51%)
WD40 repeat 513..557 CDD:293791 17/43 (40%)
WD40 repeat 571..608 CDD:293791 13/36 (36%)
WD40 repeat 613..654 CDD:293791 31/40 (78%)
dnai1XP_031750048.1 WD40 <319..665 CDD:225201 174/346 (50%)
WD40 repeat 326..372 CDD:293791 26/46 (57%)
WD40 repeat 378..415 CDD:293791 18/36 (50%)
WD40 repeat 426..483 CDD:293791 26/56 (46%)
WD40 repeat 491..528 CDD:293791 18/36 (50%)
WD40 repeat 534..568 CDD:293791 12/33 (36%)
WD40 repeat 576..617 CDD:293791 31/40 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 384 1.000 Domainoid score I817
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 569 1.000 Inparanoid score I1054
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007081
OrthoInspector 1 1.000 - - oto102435
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4417
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.050

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