DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and dnai4

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001106504.1 Gene:dnai4 / 100127694 XenbaseID:XB-GENE-5890871 Length:795 Species:Xenopus tropicalis


Alignment Length:720 Identity:176/720 - (24%)
Similarity:290/720 - (40%) Gaps:146/720 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KSRQLLKPDDQLDLTEAELGEEITKVLTPTNTNIVRNLVVYSFKEGEFVPAPLPGNTVTLIAFAG 106
            |..:|..|.|...:..:::...::...|..|.:.|          |.|          |...|.|
 Frog   108 KQSKLFTPPDASGIATSDMFSSLSLQQTAFNASFV----------GPF----------TRSTFGG 152

  Fly   107 NSLHVDSDEGRRQIEESDEIGYPLPMPNYTVVE--QRETDNVDGEEGEGEEDDDGATAKDAAVED 169
            :::...|.|.....|..::.|:...:.:.:.::  |.|...:       |||.|    |...:..
 Frog   153 STVSRSSKETESLTEYIEDTGFKRELASLSEIQGKQHEMQPI-------EEDLD----KIINIFI 206

  Fly   170 EDVE------------EEDDEEAKGTEGDEGEGEGEGEGAAARQEDDEPAHQAAAVSSKKRKLIN 222
            .|.|            ..|.|.|                      |.......|.....|.|:.|
 Frog   207 TDTETLWLLDMPPALTSSDSENA----------------------DLIRVRNQAYEDLCKDKVGN 249

  Fly   223 QFNYCERGALTYTNPKRNVDTQTIPPPRSQFGANVLQWVIYDSY-----------MENFAESQKD 276
            . .|.||...|::...::.:.|.........|.....|.:||||           ::...||:..
 Frog   250 D-KYIERMMQTFSGAPKSKEVQCDRIILEDIGVTASVWDLYDSYYSPESLTVKETVDRATESKNI 313

  Fly   277 GTKKEERKRGKRE-------KKFRDKSAIAEQL------------NKKYLKCWQ------ILERM 316
            .|.:....||.|.       ..|...:...|.|            :::.||..:      .:||:
 Frog   314 STSRSSESRGTRSVNSLGRADSFSSSATDIEGLPLARIPDEAEPDSEEILKLEKFQQDLFFMERV 378

  Fly   317 INQNIYDDIAHDYRY------WEDPADEFREGEGNLLP-----LWKFQYDKTKKMNVTDILFNPS 370
            :.:|.:......||.      .|:..|:......|::.     ||.|..|.||..||:.|.:|..
 Frog   379 VVENTFQSRLAAYRQLPVIADHEEDEDKISAVSSNIMSPSLNRLWSFACDVTKGHNVSSISWNKK 443

  Fly   371 YYDLFAVCFGSHDFMKQTNEGYLCLFTVKNPSFPDYIIQTDCGVMCCDIHPTYPFLAVIGLYDGN 435
            ..||.||.:|...|.:|.. |..|.:::||..:|:.|...:|||...|....:|.|..:|:|:|.
 Frog   444 NSDLLAVGYGQFGFTEQKG-GMACCWSLKNIMWPERIFHCECGVTAVDFSAVHPNLLAVGMYNGT 507

  Fly   436 VAVYNLREDCKEPLYVSRGVNCKHGECVWQIKW------GLDMADGEVNFFSVSSDGRVFNWILM 494
            ||:||::.:...|:..|.....||...|||:||      .|....||: ..||.:|||:..|.:.
 Frog   508 VAIYNVQNNEDFPVLDSSDNPNKHTSPVWQLKWIEHDRGNLGDDKGEI-LVSVCADGRITRWHIR 571

  Fly   495 QNKLWVTTIITLYRENGLVDGPDGTK-------------VTLKSGGSCMVFHPVDNKIFLVGTEC 546
            :. |....::.|.|     .|.:.:|             ::.::.|.|..|.|.|:.|:|.|||.
 Frog   572 KG-LDCNDLMKLKR-----TGSEKSKKSSNEKEKKGEAFISRQAPGMCFDFLPKDSNIYLAGTEE 630

  Fly   547 GYIYKCSTAFSSKYLMTYYAHNMSVYRIDFNRFNSNIFVSCGADWMVKVWEDMRPDPLFIF-DLG 610
            |:|:|||.:::.::|.||..|...||:|.::.|..::|:||.|||.:.:|:.....|:..| :..
 Frog   631 GHIHKCSCSYNEQFLDTYRGHKGPVYKIAWSPFCPDVFLSCSADWCIHLWQQDVLSPILTFSNTT 695

  Fly   611 AAVGDVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYKAICIQAVVPKRKNKLTRLSFNEKLAFIVV 675
            .||.|:.|:|.|:.:|.|| ||.:|.::||..:....:.:....|  ..|||.:.|.:....:::
 Frog   696 NAVYDIMWSPSSALMFGAV-TENRVEIWDLGTSTIDPLIVNEANP--GVKLTSILFAKNTNCVLI 757

  Fly   676 GDEKG 680
            ||..|
 Frog   758 GDSDG 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 110/348 (32%)
WD40 repeat 362..412 CDD:293791 16/49 (33%)
WD40 413..640 CDD:295369 79/246 (32%)
WD40 repeat 415..454 CDD:293791 12/38 (32%)
WD40 repeat 463..505 CDD:293791 15/47 (32%)
WD40 repeat 513..557 CDD:293791 17/56 (30%)
WD40 repeat 571..608 CDD:293791 13/37 (35%)
WD40 repeat 613..654 CDD:293791 13/40 (33%)
dnai4NP_001106504.1 WD40 359..782 CDD:225201 123/415 (30%)
WD40 431..768 CDD:295369 108/343 (31%)
WD40 repeat 435..480 CDD:293791 15/45 (33%)
WD40 repeat 487..523 CDD:293791 11/35 (31%)
WD40 repeat 613..650 CDD:293791 17/36 (47%)
WD40 repeat 656..693 CDD:293791 12/36 (33%)
WD40 repeat 698..736 CDD:293791 13/38 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D310818at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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