DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9344 and LSM3

DIOPT Version :10

Sequence 1:NP_611528.1 Gene:CG9344 / 37372 FlyBaseID:FBgn0034564 Length:79 Species:Drosophila melanogaster
Sequence 2:NP_013543.3 Gene:LSM3 / 851159 SGDID:S000006434 Length:89 Species:Saccharomyces cerevisiae


Alignment Length:64 Identity:21/64 - (32%)
Similarity:26/64 - (40%) Gaps:9/64 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VAVKLNNGVDYRGVLACLDGYMNICLEQTEEYVNGQLKN--------KYGDAFIRGNNVLYIST 74
            |.:||.......|.|...|.:.||.|....|.:. ||.|        :....||||:.|..|||
Yeast    16 VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIY-QLNNEELSESERRCEMVFIRGDTVTLIST 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9344NP_611528.1 LSm6 8..73 CDD:212473 18/61 (30%)
LSM3NP_013543.3 LSm3 4..78 CDD:212477 19/62 (31%)

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