DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9344 and LSM8

DIOPT Version :10

Sequence 1:NP_611528.1 Gene:CG9344 / 37372 FlyBaseID:FBgn0034564 Length:79 Species:Drosophila melanogaster
Sequence 2:NP_001185323.1 Gene:LSM8 / 842881 AraportID:AT1G65700 Length:141 Species:Arabidopsis thaliana


Alignment Length:51 Identity:16/51 - (31%)
Similarity:26/51 - (50%) Gaps:4/51 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRKEALSQFINQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYV 51
            |:....|...::||    ::|..|:|.:..|||...|...||.|:::.|.|
plant     1 MAATTGLETLVDQI----ISVITNDGRNIVGVLKGFDQATNIILDESHERV 47

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9344NP_611528.1 LSm6 8..73 CDD:212473 14/44 (32%)
LSM8NP_001185323.1 LSm8 7..137 CDD:212474 15/45 (33%)

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