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Protein Alignment CG9344 and lsm6
DIOPT Version :9
Sequence 1: | NP_611528.1 |
Gene: | CG9344 / 37372 |
FlyBaseID: | FBgn0034564 |
Length: | 79 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001165068.1 |
Gene: | lsm6 / 779701 |
XenbaseID: | XB-GENE-1007008 |
Length: | 80 |
Species: | Xenopus tropicalis |
Alignment Length: | 77 |
Identity: | 66/77 - (85%) |
Similarity: | 70/77 - (90%) |
Gaps: | 0/77 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 RKEALSQFINQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYVNGQLKNKYGDAFIRGN 67
||:..|.|:.||.||||.||||:|||||||||||||||||.||||||||||||||||||||||||
Frog 4 RKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGN 68
Fly 68 NVLYISTQKRRV 79
|||||||||||:
Frog 69 NVLYISTQKRRM 80
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG9344 | NP_611528.1 |
LSm6 |
8..73 |
CDD:212473 |
57/64 (89%) |
lsm6 | NP_001165068.1 |
LSm6 |
7..74 |
CDD:212473 |
57/66 (86%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
122 |
1.000 |
Domainoid score |
I5607 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H38271 |
Inparanoid |
1 |
1.050 |
137 |
1.000 |
Inparanoid score |
I4433 |
OMA |
1 |
1.010 |
- |
- |
|
QHG54779 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1627235at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000850 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto104086 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR11021 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R669 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X3643 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
12 | 12.110 |
|
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