DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9344 and Snrpf

DIOPT Version :10

Sequence 1:NP_611528.1 Gene:CG9344 / 37372 FlyBaseID:FBgn0034564 Length:79 Species:Drosophila melanogaster
Sequence 2:NP_001119563.1 Gene:Snrpf / 680737 RGDID:1588229 Length:86 Species:Rattus norvegicus


Alignment Length:63 Identity:33/63 - (52%)
Similarity:44/63 - (69%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FINQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYVNGQLKNKYGDAFIRGNNVLYI 72
            |:|.:.|:||.|||..|::|:|.|..:|||||:.|..||||::|.|....|:..||.||||||
  Rat    10 FLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYI 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9344NP_611528.1 LSm6 8..73 CDD:212473 33/63 (52%)
SnrpfNP_001119563.1 Sm_F 6..74 CDD:212469 33/63 (52%)

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