DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9344 and lsm7

DIOPT Version :10

Sequence 1:NP_611528.1 Gene:CG9344 / 37372 FlyBaseID:FBgn0034564 Length:79 Species:Drosophila melanogaster
Sequence 2:NP_001041471.1 Gene:lsm7 / 573047 ZFINID:ZDB-GENE-030131-8284 Length:103 Species:Danio rerio


Alignment Length:84 Identity:25/84 - (29%)
Similarity:41/84 - (48%) Gaps:15/84 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RKEA---LSQFINQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYV---NGQLK----- 56
            :||:   ||::|:    :.:.||...|.:..|||...|..:|:.|:.|.||:   :.|.|     
Zfish     8 KKESIFDLSKYID----KHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDT 68

  Fly    57 NKYGDAFIRGNNVLYISTQ 75
            .:.|....||.:|:.|..|
Zfish    69 RQLGLVVCRGTSVVLICPQ 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9344NP_611528.1 LSm6 8..73 CDD:212473 20/72 (28%)
lsm7NP_001041471.1 LSm7 9..97 CDD:212476 25/83 (30%)

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