DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9344 and lsm8

DIOPT Version :10

Sequence 1:NP_611528.1 Gene:CG9344 / 37372 FlyBaseID:FBgn0034564 Length:79 Species:Drosophila melanogaster
Sequence 2:NP_001289395.1 Gene:lsm8 / 566017 ZFINID:ZDB-GENE-070629-3 Length:96 Species:Danio rerio


Alignment Length:71 Identity:21/71 - (29%)
Similarity:34/71 - (47%) Gaps:8/71 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ALSQFINQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYV----NGQLKNKYGDAFIRG 66
            ||..:|:    |.||:..::|....|.|...|..:|:.|:::.|.|    .|..:...|...:||
Zfish     4 ALESYIH----RTVAIVTSDGRMIVGTLKGFDQAINLILDESHERVFSSSQGVEQVVLGLYIVRG 64

  Fly    67 NNVLYI 72
            :||..|
Zfish    65 DNVAVI 70

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9344NP_611528.1 LSm6 8..73 CDD:212473 19/69 (28%)
lsm8NP_001289395.1 LSm8 2..92 CDD:212474 21/71 (30%)

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