DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9344 and lsm6

DIOPT Version :10

Sequence 1:NP_611528.1 Gene:CG9344 / 37372 FlyBaseID:FBgn0034564 Length:79 Species:Drosophila melanogaster
Sequence 2:XP_005160025.1 Gene:lsm6 / 415167 ZFINID:ZDB-GENE-040625-50 Length:90 Species:Danio rerio


Alignment Length:77 Identity:63/77 - (81%)
Similarity:70/77 - (90%) Gaps:0/77 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RKEALSQFINQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYVNGQLKNKYGDAFIRGN 67
            ||:..|.|:.||.||||.||||:|||||||||||||||||.:|||||||||||||||||||:|||
Zfish    14 RKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKYGDAFLRGN 78

  Fly    68 NVLYISTQKRRV 79
            ||||||||||::
Zfish    79 NVLYISTQKRKM 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9344NP_611528.1 LSm6 8..73 CDD:212473 55/64 (86%)
lsm6XP_005160025.1 LSm6 17..84 CDD:212473 55/66 (83%)

Return to query results.
Submit another query.