DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9344 and Lsm5

DIOPT Version :10

Sequence 1:NP_611528.1 Gene:CG9344 / 37372 FlyBaseID:FBgn0034564 Length:79 Species:Drosophila melanogaster
Sequence 2:NP_001100759.1 Gene:Lsm5 / 306222 RGDID:1308655 Length:91 Species:Rattus norvegicus


Alignment Length:64 Identity:13/64 - (20%)
Similarity:29/64 - (45%) Gaps:3/64 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QFINQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEY---VNGQLKNKYGDAFIRGNNV 69
            :.:::..|..:.:.:.:..:..|.|...|.::|:.||...|:   ..|:...|.....:.|||:
  Rat    16 ELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNI 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9344NP_611528.1 LSm6 8..73 CDD:212473 13/64 (20%)
Lsm5NP_001100759.1 LSm5 11..86 CDD:212479 13/64 (20%)

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