DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9344 and lsm8

DIOPT Version :10

Sequence 1:NP_611528.1 Gene:CG9344 / 37372 FlyBaseID:FBgn0034564 Length:79 Species:Drosophila melanogaster
Sequence 2:NP_588509.1 Gene:lsm8 / 2539322 PomBaseID:SPCC1840.10 Length:94 Species:Schizosaccharomyces pombe


Alignment Length:74 Identity:20/74 - (27%)
Similarity:32/74 - (43%) Gaps:14/74 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ALSQFINQIHGRPVAVKLNNGVDYRGVLACLDGY---MNICLEQTEEYVNGQLKN----KYGDAF 63
            :|:.|:.|    .|.|..|:|   |.||..|.|:   .|:.|..:.|.:....::    ..|...
pombe     2 SLADFMEQ----RVQVITNDG---RVVLGSLKGFDHTTNLILSDSFERIISMDQDMETIPLGVYL 59

  Fly    64 IRGNNVLYI 72
            :||.||..:
pombe    60 LRGENVAMV 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9344NP_611528.1 LSm6 8..73 CDD:212473 19/72 (26%)
lsm8NP_588509.1 LSm8 2..90 CDD:212474 20/74 (27%)

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