DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCNA2 and CG1688

DIOPT Version :9

Sequence 1:NP_004965.1 Gene:KCNA2 / 3737 HGNCID:6220 Length:499 Species:Homo sapiens
Sequence 2:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster


Alignment Length:169 Identity:39/169 - (23%)
Similarity:68/169 - (40%) Gaps:25/169 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   338 GVILF----SSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAG 398
            |..||    :||:.....|..:||..|..:|..::|..:||:|:|.:.|.|..||:.....|:.|
  Fly   166 GAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVG 230

Human   399 VLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVT---SCPKIPSSPDLKKSRSASTISKSDYME 460
                   ||:::...:      :.|...|..||.|   .|.::....:.::..:..|.:.|    
  Fly   231 -------VPLMLMCLS------SLGALLADGLQCTYVRLCCQLQRHQEHRRKSTPGTSTPS---- 278

Human   461 IQEGVNNSNEDF-REENLKTANCTLANTNYVNITKMLTD 498
            .....|:..:|. :....:.|||.....:..|....|.|
  Fly   279 ASSAANSREKDTDKRSKRRMANCKGCQYDAANSETSLND 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNA2NP_004965.1 Tetramerization domain. /evidence=ECO:0000250|UniProtKB:P63142 1..125
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
BTB_POZ 33..159 CDD:365784
Ion_trans 162..420 CDD:395416 23/85 (27%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 312..325
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 374..379 2/4 (50%)
PDZ-binding. /evidence=ECO:0000250|UniProtKB:P63142 497..499 1/2 (50%)
CG1688NP_610516.1 Ion_trans_2 <191..247 CDD:285168 16/68 (24%)
Ion_trans_2 822..896 CDD:285168
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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