DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCNA2 and Sh

DIOPT Version :9

Sequence 1:NP_004965.1 Gene:KCNA2 / 3737 HGNCID:6220 Length:499 Species:Homo sapiens
Sequence 2:NP_001303569.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster


Alignment Length:467 Identity:319/467 - (68%)
Similarity:371/467 - (79%) Gaps:24/467 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    17 GHPQDTYDPEADHECCERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRN 81
            |.||.......||:.|||||||:|||||||||:||.|||:||||||.:|:||||||||||||||:
  Fly    81 GGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRS 145

Human    82 RPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQ 146
            ||||||||||||||||||||||||||:|||||:|||||::|:..||||||:|||||||||:||.|
  Fly   146 RPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDQAINKFREDEGFIKEEERPLPDNEKQ 210

Human   147 RQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNST-I 210
            |:|||||||||||..||::||:||.|||:|||.|||||||.|:...        .|:|.:|.| |
  Fly   211 RKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYK--------VFNTTTNGTKI 267

Human   211 GYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELA 275
            ...:....|||||::||||||||:||..|||.|||:|..|..::||:|||:|||||||||.|.:|
  Fly   268 EEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVA 332

Human   276 EK------------PEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMREL 328
            |:            |:| :...|||||||||||||||||||||||||||||||||:|||||||||
  Fly   333 EEEDTLNLPKAPVSPQD-KSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMREL 396

Human   329 GLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSL 393
            |||||||||||:|||||||||||....|.|.||||.||||||:|||||||||.|..:.|||||||
  Fly   397 GLLIFFLFIGVVLFSSAVYFAEAGSDSSFFKSIPDGFWWAVVTMTTVGYGDMRPVGVWGKIVGSL 461

Human   394 CAIAGVLTIALPVPVIVSNFNYFYHRETEGEE-QAQ-YLQVTSCPKIPSSPDLKKSRSASTISKS 456
            ||||||||||||||||||||||||||||:.|| |:| :..|||||.:|.:......:|:.:.|.|
  Fly   462 CAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYLPGTLGQHMKKSSLSESSS 526

Human   457 DYMEIQEGVNNS 468
            |.|::.:||.::
  Fly   527 DMMDLDDGVEST 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNA2NP_004965.1 Tetramerization domain. /evidence=ECO:0000250|UniProtKB:P63142 1..125 84/107 (79%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 3/8 (38%)
BTB_POZ 33..159 CDD:365784 106/125 (85%)
Ion_trans 162..420 CDD:395416 185/270 (69%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 312..325 11/12 (92%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 374..379 4/4 (100%)
PDZ-binding. /evidence=ECO:0000250|UniProtKB:P63142 497..499
ShNP_001303569.1 BTB_2 99..187 CDD:280393 75/87 (86%)
BTB 99..182 CDD:197585 72/82 (88%)
Ion_trans 274..488 CDD:278921 160/214 (75%)
Ion_trans_2 403..479 CDD:285168 61/75 (81%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 362 1.000 Domainoid score I953
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 620 1.000 Inparanoid score I885
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48093
OrthoDB 1 1.010 - - D307298at33208
OrthoFinder 1 1.000 - - FOG0000074
OrthoInspector 1 1.000 - - otm42203
orthoMCL 1 0.900 - - OOG6_101149
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3654
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1312.910

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