DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act57B and ARP1

DIOPT Version :9

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_011997.1 Gene:ARP1 / 856530 SGDID:S000001171 Length:384 Species:Saccharomyces cerevisiae


Alignment Length:360 Identity:171/360 - (47%)
Similarity:252/360 - (70%) Gaps:3/360 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :|:|||||:.||||:|::.|:|:...:||..::..||:...|.|:::|:.||..||:|.|:|||:
Yeast    15 VVIDNGSGIIKAGFSGEERPKALEYCLVGNTKYDKVMLEGLQGDTFIGNNAQKLRGLLKLRYPIK 79

  Fly    74 HGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
            ||::.:||.||.||.:.....|::.. .|||:|:||||:||..|||:|.|::||||:..|:||:.
Yeast    80 HGVVEDWDSMELIWSYVLNEVLQLQNIGEHPLLITEAPMNPLKNREQMAQVLFETFDVSALYVSN 144

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL-MKILTERGYSF 201
            .|||||||||||||.|:|.|:|...|||||:|:|||.:::|:|:.|.|:|:.| .::....|.|.
Yeast   145 PAVLSLYASGRTTGCVVDCGEGYCSTVPIYDGFALPASMMRMDIGGADITEQLQFQLRKSAGVSL 209

  Fly   202 TTTAEREIVRDIKEKLCYVALDFEQEMATAAAST-SLEKSYELPDGQVITIGNERFRCPESLFQP 265
            .:::||||||.:|||:||:|.:.::|.......| .|..:::||||:.|.:||:|:|.||.||.|
Yeast   210 FSSSEREIVRTMKEKVCYLAKNIKKEEEKYLQGTQDLISTFKLPDGRCIEVGNDRYRAPEILFSP 274

  Fly   266 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITSLAPSTIKIKI 330
            ..:|:...|:.:....||.|.|:|:||.|.::|::|||||...|..|||..::.:|...|.||||
Yeast   275 QIIGLGYDGLSDMCMQSIWKVDLDLRKPLLSSIILSGGTTTLKGFGDRMLWDLEALTKGTSKIKI 339

  Fly   331 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 365
            |||.||||:.|||||||..|||||::|..|.::.|
Yeast   340 IAPSERKYTTWIGGSILTGLSTFQRLWTKKSDWLE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 PTZ00281 1..376 CDD:173506 171/360 (48%)
ARP1NP_011997.1 ACTIN 12..384 CDD:214592 171/360 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.885657 Normalized mean entropy S9
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.760

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