DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act57B and ARP4

DIOPT Version :9

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_012454.1 Gene:ARP4 / 853364 SGDID:S000003617 Length:489 Species:Saccharomyces cerevisiae


Alignment Length:486 Identity:126/486 - (25%)
Similarity:194/486 - (39%) Gaps:140/486 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK------ 62
            |||:|:|:|.||.....|::|.|.|:::.||:.|:               |..||...|      
Yeast    12 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGK---------------YTADEGNKKIFSEQS 61

  Fly    63 ----RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQ 122
                |....||..||:|::.:||..::.|.....|||.:..... |.||||...|...||:|..:
Yeast    62 IGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLE 126

  Fly   123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
            ::.|.....|.|:|..:....:|:||...:|:|.|.......||.:|..|..:..|..:||:.:.
Yeast   127 VLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFIN 191

  Fly   188 DYLMKILTERG---------------------------YSFTTTAEREIVRDIKEKLCYVALDFE 225
            ..:.|.|..:.                           |.:..  .|...::.||.||::.....
Yeast   192 HLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYAN--NRGFFQECKETLCHICPTKT 254

  Fly   226 QEMATAAASTSLEKSYELPDGQVITIGNE-RFRCPESLFQP-----------SFLGM-------- 270
            .|......|::.::|.|.|..:.|...|| |:...|.||.|           |..|:        
Yeast   255 LEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDY 319

  Fly   271 -------------------------------------------------------------ESCG 274
                                                                         |..|
Yeast   320 VPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIG 384

  Fly   275 IHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPP---ER 336
            :.:.||:|||..|||:|..|..|:|::|||:..||::||:..|:..:.|| :|.:|:...   ||
Yeast   385 LADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPS-LKFRILTTGHTIER 448

  Fly   337 KYSVWIGGSILASLSTFQQMWISKEEYDESG 367
            :|..|:|||||.||.||.|:|:.|:||:|.|
Yeast   449 QYQSWLGGSILTSLGTFHQLWVGKKEYEEVG 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 PTZ00281 1..376 CDD:173506 126/486 (26%)
ARP4NP_012454.1 COG5277 9..488 CDD:227602 126/486 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.885657 Normalized mean entropy S9
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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