DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act57B and ARP2

DIOPT Version :9

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_010255.1 Gene:ARP2 / 851532 SGDID:S000002187 Length:391 Species:Saccharomyces cerevisiae


Alignment Length:376 Identity:178/376 - (47%)
Similarity:252/376 - (67%) Gaps:16/376 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP---RHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 70
            :|:|.|:|..|.|.||::.|...||||||||   ..:...|....||..:||||...|..|.:.|
Yeast     7 IVLDQGTGFVKIGRAGENFPDYTFPSIVGRPILRAEERASVATPLKDIMIGDEASEVRSYLQISY 71

  Fly    71 PIEHGIITNWDDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 134
            |:|:|||.||.|||.:|.:.|:.:::: :.....:||||.|:||..|||||.::|||.::...:|
Yeast    72 PMENGIIKNWTDMELLWDYAFFEQMKLPSTSNGKILLTEPPMNPLKNREKMCEVMFEKYDFGGVY 136

  Fly   135 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 199
            |||||||:|||.|.::|:|:||||||:|.||:||...|.|...|||:||||:|.:|:.:|:.|||
Yeast   137 VAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLSHLTRRLDVAGRDVTRHLIDLLSRRGY 201

  Fly   200 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPESLFQ 264
            :|..||:.|.||.||||||||:.|.:.:...|..:|:|.:|||||||:.|.:|.|||..||.|||
Yeast   202 AFNRTADFETVRQIKEKLCYVSYDLDLDTKLARETTALVESYELPDGRTIKVGQERFEAPECLFQ 266

  Fly   265 PSFLGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITSL-------- 321
            |..:.:|..|:.|.::|::...|||||..||..||:|||::||||:..|::||:..|        
Yeast   267 PGLVDVEQPGVGELLFNTVQSADVDIRSSLYKAIVLSGGSSMYPGLPSRLEKELKQLWFSRVLHN 331

  Fly   322 APSTI---KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESGP 368
            .||.:   |::|..||.||:.|:|||::||| ::....||:||:|:.||||
Yeast   332 DPSRLDKFKVRIEDPPRRKHMVFIGGAVLASIMADKDHMWLSKQEWQESGP 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 PTZ00281 1..376 CDD:173506 178/376 (47%)
ARP2NP_010255.1 ACTIN 4..387 CDD:214592 178/376 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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