DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act57B and ARP4A

DIOPT Version :10

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001323058.1 Gene:ARP4A / 843728 AraportID:AT1G73910 Length:167 Species:Arabidopsis thaliana


Alignment Length:117 Identity:42/117 - (35%)
Similarity:64/117 - (54%) Gaps:16/117 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------MGQKDS 53
            |||:|:|||.||..||||:||:|||:|||||:||.....|:.:.               .|::..
plant     5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKL 69

  Fly    54 YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 104
            |.|.:|.: :|..:.:..|.:.||:|:||.::.:|.|.|.....:...|..|
plant    70 YTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRASSELTAAERKV 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 ASKHA_NBD_actin 7..371 CDD:466823 39/114 (34%)
ARP4ANP_001323058.1 ASKHA_ATPase-like 4..>109 CDD:483947 39/103 (38%)

Return to query results.
Submit another query.