DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act57B and ARP2

DIOPT Version :9

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_189336.1 Gene:ARP2 / 822317 AraportID:AT3G27000 Length:389 Species:Arabidopsis thaliana


Alignment Length:378 Identity:169/378 - (44%)
Similarity:250/378 - (66%) Gaps:14/378 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 66
            |....:|.|||:|..|.||||::.|.:|||.:||||  |::..::....||..||:.....|..|
plant     2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66

  Fly    67 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 131
            .:.||:.:||:.||||||.:|.|.|||||::.|.:..:|||:.||||..|||||.:.|||.:|..
plant    67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFEKYNFA 131

  Fly   132 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 196
            .:::.|||||:|||.|..||:|:||||||:|.||:.:||:.||...|:::|||.:|.||:.:|:.
plant   132 GVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSR 196

  Fly   197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPES 261
            |||:...||:.|.||:|||||||::.|:::|......:|.|.|:|.||||:||.:|.|||:.||:
plant   197 RGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEA 261

  Fly   262 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITSLAPSTI 326
            ||.|..:.:|..|:.:.|:..|.:.|:|.|..||.:||:|||:|||||:..|::|||......|:
plant   262 LFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTV 326

  Fly   327 -----------KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 367
                       :::|..||.||:.|::||::||. :....:.||::|:|.|.|
plant   327 LKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 PTZ00281 1..376 CDD:173506 169/378 (45%)
ARP2NP_189336.1 ACTIN 4..387 CDD:214592 168/376 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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