DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act57B and arp2

DIOPT Version :10

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001342919.1 Gene:arp2 / 5802965 PomBaseID:SPAC11H11.06 Length:390 Species:Schizosaccharomyces pombe


Alignment Length:377 Identity:180/377 - (47%)
Similarity:260/377 - (68%) Gaps:14/377 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILT 67
            |.|.:|:|||:|..|.|:|.|:.||..||||||||  |.:.....:..||..|||||::.|.:|.
pombe     2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQ 66

  Fly    68 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 132
            :|||:|:|||.::::|.::|.:||:.:|::.|....:||||.|:||.||||||.:.|||.:....
pombe    67 VKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGG 131

  Fly   133 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
            :||||||||||||.|.::|:|:||||||:|.||:||...|.|.:.|||:||||.|.||:.:|..:
pombe   132 VYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRK 196

  Fly   198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPESL 262
            ||:|..||:.|.||::|||||||:.|.|.:...:..:|.|.::|.||||:||.:|:||:.|||.|
pombe   197 GYAFNRTADFETVREMKEKLCYVSYDLELDHKLSEETTVLMRNYTLPDGRVIKVGSERYECPECL 261

  Fly   263 FQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITSL------ 321
            |||..:|.|..|:.|.::::|...||||||.||..||:|||::||.|:..|::|||..|      
pombe   262 FQPHLVGSEQPGLSEFIFDTIQAADVDIRKYLYRAIVLSGGSSMYAGLPSRLEKEIKQLWFERVL 326

  Fly   322 --APSTI---KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 367
              .|:.:   |:||...|.|:::|:|||::||. ::....||:||.|::|.|
pombe   327 HGDPARLPNFKVKIEDAPRRRHAVFIGGAVLADIMAQNDHMWVSKAEWEEYG 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 ASKHA_NBD_actin 7..371 CDD:466823 179/375 (48%)
arp2NP_001342919.1 ASKHA_NBD_Arp2 5..384 CDD:466821 178/374 (48%)

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