DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act57B and actr3

DIOPT Version :9

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001003944.1 Gene:actr3 / 406250 ZFINID:ZDB-GENE-040428-2 Length:418 Species:Danio rerio


Alignment Length:415 Identity:152/415 - (36%)
Similarity:217/415 - (52%) Gaps:53/415 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
            |.|||.|:|..|.|:||:..|:.:.||.        ||....:.:|.|:...|.|:||||..|..
Zfish     7 ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRMMKGVDDLDFYIGDEAIDKPT 71

  Fly    65 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
            ..| |:||.|||:.:||.||:......:..||..||:|..||||.|||...|||...:||||:||
Zfish    72 YAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFN 135

  Fly   130 SPAMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 186
            .|.:|:|:||||:|.||       .|| ||.|:||||||:|.:|:.|||.:...|..:.:||||:
Zfish   136 VPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDI 200

  Fly   187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT------------AAASTSLEK 239
            |.:..::|.||..........|..:.:||:..||..|..:|.:.            ...:|..:|
Zfish   201 TYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKEFSKYDTDGSKWIKQYTGINTISKK 265

  Fly   240 SYELPDGQVITIGNERFRCPESLFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANIVMSGG 303
            .:      .|.:|.|||..||..|.|.|...: :..|.|.|...|..|.:|:|:.||.|||:|||
Zfish   266 EF------TIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGG 324

  Fly   304 TTMYPGIADRMQKEIT----------------SLAPSTIKIKIIAPPERKYSVWIGGSILASLST 352
            :||:.....|:|:::.                .|.|..|.:::|....::|:||.|||:|||...
Zfish   325 STMFRDFGRRLQRDLKRTVDARLKLSEELSGGKLKPKPIDVQVITHHMQRYAVWFGGSMLASTPE 389

  Fly   353 FQQMWISKEEYDESGPGIV-HRKCF 376
            |.|:..:|::|:|.||.|. |...|
Zfish   390 FYQVCHTKKDYEEIGPSICRHNPVF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 PTZ00281 1..376 CDD:173506 151/413 (37%)
actr3NP_001003944.1 PTZ00280 2..417 CDD:240343 152/415 (37%)
COG5277 6..410 CDD:227602 150/409 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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