DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act57B and Actrt1

DIOPT Version :10

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001013983.1 Gene:Actrt1 / 302796 RGDID:1359559 Length:376 Species:Rattus norvegicus


Alignment Length:369 Identity:183/369 - (49%)
Similarity:244/369 - (66%) Gaps:3/369 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
            |::.|||||:||.|.:|:..||.|..|:||.|:.........:|..:||:|||.....|.|.|||
  Rat    11 AVIFDNGSGLCKVGISGEIVPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPI 75

  Fly    73 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
            |.|::|.||||||:|...|..||.|.|.|.||.:||..|||:..|||.|:||||.||.||:|:..
  Rat    76 ERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPRETREKTTEIMFEKFNVPALYLCN 140

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            .||.:|.||...||:||||||||:.||||||||:||.||.:|.:||||:|::|.::|..:||:|.
  Rat   141 HAVGALCASACITGLVLDSGDGVTCTVPIYEGYSLPRAITKLYVAGRDITEHLTRLLLAKGYTFP 205

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPESLFQPSF 267
            ....:.:|.|||||||.|:...:........|.|   .|:||||..|.:.:...:.||.||.|..
  Rat   206 CILNKAVVDDIKEKLCTVSWGSKDSEKCYQRSLS---EYKLPDGNTIQMSDHLCQVPEVLFTPEH 267

  Fly   268 LGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITSLAPSTIKIKIIA 332
            ||:...||.:.|.|||||||.||:::|:|.||:|||||::||:.||:.||:..||.....|||.|
  Rat   268 LGIHDLGISKMVCNSIMKCDTDIQENLFAEIVLSGGTTLFPGLQDRLLKELEVLAFEGTPIKITA 332

  Fly   333 PPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 376
            .|:|.||.|||||::.||:||:|||::.|::.|.|..:|.||||
  Rat   333 SPDRCYSAWIGGSVMTSLTTFKQMWVTAEDFKEYGAFVVQRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 ASKHA_NBD_actin 7..371 CDD:466823 178/362 (49%)
Actrt1NP_001013983.1 ASKHA_NBD_actin_Arp-T1-3 10..367 CDD:466848 177/358 (49%)

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