DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act57B and Actr3b

DIOPT Version :9

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001004365.1 Gene:Actr3b / 242894 MGIID:2661120 Length:418 Species:Mus musculus


Alignment Length:416 Identity:149/416 - (35%)
Similarity:224/416 - (53%) Gaps:59/416 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VVDNGSGMCKAGFAGDDAPRAVFPS---------IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
            |||.|:|..|.|:||:..|:.:.||         :|.:.:.: |:.|:...|.::||||..|...
Mouse     9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRR-VLRGVDDLDFFIGDEAIDKPTY 72

  Fly    66 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
            .| |:||.|||:.:||.||:......:..||..||:|..|:||.|||...|||.:.:||||:||.
Mouse    73 AT-KWPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNV 136

  Fly   131 PAMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
            |.:|:|:||||:|.||       .|| ||||:||||||:|.:|:.|||.:...|..:.:||||:|
Mouse   137 PGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201

  Fly   188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT------------AAASTSLEKS 240
            .::.::|.||..........|..:.||||.||:..|..:|.|.            ...:...:|.
Mouse   202 YFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVREFAKYDVDPRKWIKQYTGINAINQKK 266

  Fly   241 YELPDGQVITIGNERFRCPESLFQPSFLG---MESCGIHETVYNSIMKCDVDIRKDLYANIVMSG 302
            :      :|.:|.|||..||..|.|.|..   |||  |.:.|...|..|.:|:|:.||.|:|:||
Mouse   267 F------IIDVGYERFLGPEIFFHPEFANPDFMES--ISDVVDEVIQSCPIDVRRPLYKNVVLSG 323

  Fly   303 GTTMYPGIADRMQKEIT----------------SLAPSTIKIKIIAPPERKYSVWIGGSILASLS 351
            |:||:.....|:|:::.                .:.|..::::::....::|:||.|||:|||..
Mouse   324 GSTMFRDFGRRLQRDLKRVVDARLKLSQELSGGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTP 388

  Fly   352 TFQQMWISKEEYDESGPGIV-HRKCF 376
            .|.|:..:|::|:|.||.|. |...|
Mouse   389 EFFQVCHTKKDYEEYGPSICRHNPVF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 PTZ00281 1..376 CDD:173506 148/414 (36%)
Actr3bNP_001004365.1 COG5277 1..410 CDD:227602 147/410 (36%)
PTZ00280 2..417 CDD:240343 149/416 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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