DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act57B and arp-6

DIOPT Version :10

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_495681.4 Gene:arp-6 / 174288 WormBaseID:WBGene00007434 Length:418 Species:Caenorhabditis elegans


Alignment Length:402 Identity:106/402 - (26%)
Similarity:188/402 - (46%) Gaps:58/402 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 70
            :..::.|||....|.|....::||.| |:.:.:.:|:       :|..:|..|.:......:|.|
 Worm     3 LTTIIFDNGGHNMKIGTIDSESPRLV-PNSIVKAKHE-------KKRVFVAHEQEECSDKFSLFY 59

  Fly    71 --PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE----APLNPKANREKMTQIMFETFN 129
              |||.|.:.|||..::||..|| ..:.|......:.||:    .|..|..:.|    |:|:.|.
 Worm    60 VRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSE----ILFDYFG 119

  Fly   130 SPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
            ...::....:.|....|.:..    .:|:|||...:.......|..:..:::|:|:.|:.||:.|
 Worm   120 FTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKL 184

  Fly   191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA----AASTSLEKSYELPD------ 245
            ...::.|  ....:.|..::.:.||.||:|:.:|::.|..|    ..:|:: |.|.:||      
 Worm   185 KDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQENTTM-KRYIMPDFHSTFR 246

  Fly   246 GQV-------------ITIGNERFRCPESLFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 297
            |.|             |.:|.|||..||.||.||.:.::.||:.|.|..||.:|...:|..|..|
 Worm   247 GVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAEN 311

  Fly   298 IVMSGGTTMYPGIADRMQKEITSLAPS----TIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
            |::.||::.:||..:|:::|:.|:.|:    .:...:|.|....   |..|..|  |:..:..||
 Worm   312 IIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHS---WHCGQEL--LTASKVPWI 371

  Fly   359 SKEEYDESGPGI 370
            :::::||.|..:
 Worm   372 NRKDWDERGDSL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 ASKHA_NBD_actin 7..371 CDD:466823 106/401 (26%)
arp-6NP_495681.4 ASKHA_NBD_Arp6 5..380 CDD:466816 105/395 (27%)

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