DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act57B and arx-1

DIOPT Version :9

Sequence 1:NP_523800.1 Gene:Act57B / 37368 FlyBaseID:FBgn0000044 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_491066.1 Gene:arx-1 / 171857 WormBaseID:WBGene00000199 Length:425 Species:Caenorhabditis elegans


Alignment Length:420 Identity:154/420 - (36%)
Similarity:229/420 - (54%) Gaps:56/420 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGMGQKDS 53
            |...::.|.|:|||:|..|.|:||:..|:.:.||.      |.....|.      |..|:...|.
 Worm     1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDF 65

  Fly    54 YVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
            ::||||.|.... .|:||||.|||:.:||.||:.|....:..||..||:|..||||.|||...||
 Worm    66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENR 130

  Fly   118 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPH 174
            |...:||||:||.|.:|:|:||||:|.||..:        ||:|:||||||:|.:|:.:||.:..
 Worm   131 EYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGS 195

  Fly   175 AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA---TAAA--- 233
            .|..:.:||||:|.::..:|.:|.::.......|:.:.||||.|||..|..:|..   |.||   
 Worm   196 CIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDTDAAKWL 260

  Fly   234 ------STSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGME-SCGIHETVYNSIMKCDVDIR 291
                  ::..:|.:.      :.:|.|||..||..|.|.|...| :..|.:|:...|.:|.:|:|
 Worm   261 RTYDGINSITKKPFN------VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVR 319

  Fly   292 KDLYANIVMSGGTTMYPGIADRMQKEITSLA----------------PSTIKIKIIAPPERKYSV 340
            :.||.|||:|||:||:...|.::|:::..|:                |..|.:::|:...::|:|
 Worm   320 RGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAV 384

  Fly   341 WIGGSILASLSTFQQMWISKEEYDESGPGI 370
            |.|||:|||.|.|.|:..:|.||.|.||.|
 Worm   385 WFGGSMLASTSEFYQVSHTKAEYMERGPSI 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act57BNP_523800.1 PTZ00281 1..376 CDD:173506 154/420 (37%)
arx-1NP_491066.1 PTZ00280 3..423 CDD:240343 153/418 (37%)
COG5277 7..417 CDD:227602 153/414 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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