DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rx and YOX1

DIOPT Version :10

Sequence 1:NP_726006.3 Gene:Rx / 37367 FlyBaseID:FBgn0020617 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_013685.1 Gene:YOX1 / 854981 SGDID:S000004489 Length:385 Species:Saccharomyces cerevisiae


Alignment Length:451 Identity:90/451 - (19%)
Similarity:134/451 - (29%) Gaps:176/451 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 TSPPTPS---PRGQLAAKRKSAGVFCDDNEPKLANGQLPGGNYGI-RPRSMEE-VHHQQQSHHHQ 468
            :||.:||   ||         .....||.    ...:||..|..| ||||:|. :.|...|.|  
Yeast    22 SSPVSPSFTNPR---------TSFHLDDR----GTIKLPPLNTSINRPRSVESALRHTVTSLH-- 71

  Fly   469 QQQQQQQQQQQLQQQQGFQHDFRNSGNGNPNGNSNSGDHGERL--NADSDSLVNGSCASSED--- 528
                                             .||..:|:.:  :..|||.::....||::   
Yeast    72 ---------------------------------ENSSAYGDDMLKHTQSDSALSSQLNSSQETVD 103

  Fly   529 -------LNQTNSSEQGEKITSGSDD-------------------------------------EG 549
                   |...||.::...::|..:|                                     |.
Yeast   104 ESHENLLLTPLNSKKRDYSVSSKKNDILTPLSAAKSIIIPSASKEKRRAFAFITHSQETFPKKEP 168

  Fly   550 QDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKW 614
            :.||....:.:|.||  ::.:|..|:..|||...|....|.|||...::.|..||:||||:|...
Yeast   169 KIDNAPLARRKRRRT--SSQELSILQAEFEKCPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAV 231

  Fly   615 RRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPWLSPPLLSALPGFLSHPQTVYPSYLTPPLSL 679
            :||..:.|....:......|                ||||               ..:.||..|.
Yeast   232 KRQRIATSKSTTIIQTVSPP----------------SPPL---------------DVHATPLASR 265

  Fly   680 APGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPPPPPPHGVPHPHGSHHVVPLS-----H 739
            ...::.....:.               .......|....||.||...:...|...:..|     |
Yeast   266 VKADILRDGSSC---------------SRSSSSSPLENTPPRPHHSLNRRSSTPSIKRSQALTFH 315

  Fly   740 LSPHLSRMSPHATSLGSPHHGVTPLGTPLHSSLPPSSTATTVAVSSSQSSSSSASLECSGP 800
            |:|....::|..|   ||:..|..|                  ::|...|.|.|....|.|
Yeast   316 LNPQKKTLTPVKT---SPNSRVNKL------------------INSIDHSPSKAKRPVSNP 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RxNP_726006.3 Homeodomain 560..616 CDD:459649 21/55 (38%)
OAR 876..892 CDD:461067
YOX1NP_013685.1 COG5576 126..267 CDD:227863 36/173 (21%)
Blue background indicates that the domain is not in the aligned region.

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