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Protein Alignment Rx and phox2ba
DIOPT Version :9
Sequence 1: | NP_726006.3 |
Gene: | Rx / 37367 |
FlyBaseID: | FBgn0020617 |
Length: | 904 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001139175.1 |
Gene: | phox2ba / 795258 |
ZFINID: | ZDB-GENE-090313-51 |
Length: | 155 |
Species: | Danio rerio |
Alignment Length: | 143 |
Identity: | 60/143 - (41%) |
Similarity: | 77/143 - (53%) |
Gaps: | 12/143 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 556 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKS 620
::|.||.||.||:.||..|||||..:.|||:|:||||..::.|.|.||||||||||||:|:||::
Zfish 10 RRKQRRVRTIFTSAQLKALERAFAHTQYPDIYTREELVQEIQLTEARVQVWFQNRRAKFRKQERA 74
Fly 621 ESLRLGLTHFTQLP-HRLGCGASGLPVDPWLSPPLLSALPGFLSHPQTVYPSYLTPPLSLAPGNL 684
.|.....:.....| |.....||. .||..:.| :||......| .|...||....|..|
Zfish 75 ASWNESSSKTHSSPSHDSSETASA--TDPDSTQP---SLPLIGDQKQ---DSRDRPPPEELPLLL 131
Fly 685 TMSSLAAM---GH 694
.::||.|. ||
Zfish 132 GLTSLEAQRQRGH 144
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rx | NP_726006.3 |
Homeobox |
563..615 |
CDD:278475 |
33/51 (65%) |
OAR |
876..892 |
CDD:281777 |
|
phox2ba | NP_001139175.1 |
Homeobox |
17..69 |
CDD:278475 |
33/51 (65%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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