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Protein Alignment Rx and Rhox13
DIOPT Version :9
Sequence 1: | NP_726006.3 |
Gene: | Rx / 37367 |
FlyBaseID: | FBgn0020617 |
Length: | 904 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_001077350.3 |
Gene: | Rhox13 / 691244 |
RGDID: | 1586264 |
Length: | 234 |
Species: | Rattus norvegicus |
Alignment Length: | 168 |
Identity: | 51/168 - (30%) |
Similarity: | 80/168 - (47%) |
Gaps: | 40/168 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 485 GFQHDFRNSGNGNPNGNSNSGDHGERLNADSDSLVNGSCASSEDLNQTNSSEQGEKITSGSDDEG 549
|:...:..:..|:|...|.| |..|..:.:.|....| |.:..::|:| ..||.|.
Rat 60 GYDTVYEPNVKGDPKQESES-DTEESYDDEDDDEDEG------DEDDLSTSDQ-----DTSDPEQ 112
Fly 550 QD------------------------DNCAKKKHRRNRTT----FTTYQLHELERAFEKSHYPDV 586
:: ....:::|||:|.: ||.:|:.|:|..||::.||||
Rat 113 EEAALFVAAAAPPIAPAAAAIQIPGPHRSRRRRHRRHRRSSPYLFTQWQVEEMENLFEETPYPDV 177
Fly 587 YSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKSESLR 624
.:|.|||..:|:|||:|:|||.|||||.|:.|:...||
Rat 178 LTRGELARTLNVPEVKVKVWFSNRRAKQRKNERRAMLR 215
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rx | NP_726006.3 |
Homeobox |
563..615 |
CDD:278475 |
29/55 (53%) |
OAR |
876..892 |
CDD:281777 |
|
Rhox13 | XP_001077350.3 |
Homeobox |
157..206 |
CDD:278475 |
28/48 (58%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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