DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rx and SHOX

DIOPT Version :10

Sequence 1:NP_726006.3 Gene:Rx / 37367 FlyBaseID:FBgn0020617 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_000442.1 Gene:SHOX / 6473 HGNCID:10853 Length:292 Species:Homo sapiens


Alignment Length:340 Identity:93/340 - (27%)
Similarity:137/340 - (40%) Gaps:119/340 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   492 NSGNGNPNGNSNSGDHGERLNA---------DSDSLV------NGSCA----------SSEDLNQ 531
            |.|.|...|..:|..:.|.|.:         .|||.:      .|.|.          ..|.|.:
Human    20 NGGGGGGGGKKDSITYREVLESGLARSRELGTSDSSLQDITEGGGHCPVHLFKDHVDNDKEKLKE 84

  Fly   532 TNSSEQGEKI---------TSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVY 587
            ..::...|.|         ....|::||    .|.|.||:||.||..||:||||.|:::||||.:
Human    85 FGTARVAEGIYECKEKREDVKSEDEDGQ----TKLKQRRSRTNFTLEQLNELERLFDETHYPDAF 145

  Fly   588 SREELAMKVNLPEVRVQVWFQNRRAKWRRQEKS--ESLRLGLTHFTQLPHRLGCGASGLPVDPWL 650
            .||||:.::.|.|.||||||||||||.|:||..  :.:.||..:     |...|     .|.|::
Human   146 MREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTAN-----HLDAC-----RVAPYV 200

  Fly   651 SPPLLSALPGFLSHPQTVYPSYLTPPLSLAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQ 715
            :   :.|               |..|.......|.:..:|     |||     ||:         
Human   201 N---MGA---------------LRMPFQQVQAQLQLEGVA-----HAH-----PHL--------- 228

  Fly   716 PPPPPPPHGVPHPHGSHHVVPLSHLSPHLSRMSPHATSLGSPHHGVTPLGTPLHSSLPPSSTATT 780
                       |||.:.|       :|:|....|             |.|.|: :||..|::|..
Human   229 -----------HPHLAAH-------APYLMFPPP-------------PFGLPI-ASLAESASAAA 261

  Fly   781 VAVSSSQSSSSSASL 795
            |..::::|:|.::|:
Human   262 VVAAAAKSNSKNSSI 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RxNP_726006.3 Homeodomain 560..616 CDD:459649 35/55 (64%)
OAR 876..892 CDD:461067
SHOXNP_000442.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 5/13 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..119 5/22 (23%)
Homeodomain 118..174 CDD:459649 35/55 (64%)
SH3-binding. /evidence=ECO:0000255 242..249 3/19 (16%)
OAR 272..288 CDD:461067 1/5 (20%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 274..287 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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