DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rx and CG9876

DIOPT Version :9

Sequence 1:	NP_726006.3	Gene:	Rx / 37367	FlyBaseID:	FBgn0020617	Length:	904	Species:	Drosophila melanogaster
Sequence 2:	NP_611756.1	Gene:	CG9876 / 37668	FlyBaseID:	FBgn0034821	Length:	275	Species:	Drosophila melanogaster

Alignment Length:	295	Identity:	87/295 - (29%)
Similarity:	117/295 - (39%)	Gaps:	105/295 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly   443 LPGGN-----YGIRPRSMEEVHHQQQSHHHQQQ---QQQQQQQQQLQQQQGF--------QHDFR 491
            ||.||     ||  |....|::...|||:.:.:   :.:::..:.|.:...|        :||..
  Fly    11 LPVGNPGNFYYG--PTVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEMKHDAY 73

  Fly   492 NSGNGNPNGNSNSGDHGERL-NADSDSLVNGSCASSEDLNQTNSSEQGEKITSGSDDEGQDDNCA 555
            :.|......:||.|..|... .||..:..:|:                  :.:|....
  Fly    74 SKGKMAMELSSNFGPTGAGCGGADRPAPCSGN------------------LPAGGGHH------- 113

  Fly   556 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKS 620
            .:|.|||||||::.||..||:.||::||||.:.|||||.||:|.|.||||||||||||:||.|:|
  Fly   114 SRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERS 178

  Fly   621 ESLRLGLTHFTQLPHRLGCGASGLPVDPWLSPPLLSALPGFLSHPQTVYPSYLTPPLSLAPGNLT 685
            ...|                            .||...|            .|.|    ||.:..
  Fly   179 VGSR----------------------------TLLDTAP------------QLVP----APISNN 199

  Fly   686 MSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPPPP 720
            |...|.|.|.|                 |||||||
  Fly   200 MHKYANMPHPH-----------------PQPPPPP 217

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rx	NP_726006.3	Homeobox	563..615	CDD:278475	35/51 (69%)
Rx	NP_726006.3	OAR	876..892	CDD:281777
CG9876	NP_611756.1	Homeobox	121..173	CDD:278475	35/51 (69%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24329
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	4.010