Protein Alignment Rx and Gsc

DIOPT Version :9

• Sequence 1: NP_726006.3
• Gene: Rx / 37367
• FlyBaseID: FBgn0020617
• Length: 904
• Species: Drosophila melanogaster
• Sequence 2: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Alignment Length: 509
• Identity: 119/509 - (23%)
• Similarity: 172/509 - (33%)
• Gaps: 197/509 - (38%)

  Fly   167 RNPETVSDGSVDP-----SLGDDDATDLRCGMTLT--QLRSMDNHMASML-QQHAKNGGALPYGP 223
            |:|..:.:....|     |.|:..|..|...|.|.  |...:...:.|:| ||||::..:....|
  Fly    73 RSPSDLGEQQQPPRQISRSPGNTAAYHLTTAMLLNSQQCGYLGQRLQSVLQQQHAQHQQSQSQTP 137

  Fly   224 PTPPGGQQPQVPNATPLHHGQQMGGQAGHATHAGHGHPTHHGHAPFGYHNAFGFGQGGHGYGHPE 288
            .:..|.|     :...:...::.||.|..:.              |...:..|..|.|.|.. |.
  Fly   138 SSDDGSQ-----SGVTILEEERRGGAAAASL--------------FTIDSILGSRQQGGGTA-PS 182

  Fly   289 EAAGNYLNSMHQMVEANQLQTG--ANGANPPPAPLPPSSF-------------------GSHQQH 332
            :.:....|.....:.:|.:..|  .:||..|.:|...||.                   |.|..|
  Fly   183 QGSHISSNGNQNGLTSNGISLGLKRSGAESPASPNSNSSSSAAASPIRPQRVPAMLQHPGLHLGH 247

  Fly   333 LAALAAQAQEQQNQHSKYAKSSPTG---AGPPPPPGAYFMESQTAPVAPSQINYDERSMSSASDL 394
            |||.||         |.:| :||:.   |.|...|. |...:..|.||
  Fly   248 LAAAAA---------SGFA-ASPSDFLVAYPNFYPN-YMHAAAVAHVA----------------- 284

  Fly   395 EEDDDDAAKLQLDVTSPPTPSPRGQLAAKRKSAGVFCDDNEPKLANGQLPGGNYGIRPRSMEEVH 459
                  ||::|..|:.              .:||:....:.|...:|               ..|
  Fly   285 ------AAQMQAHVSG--------------AAAGLSGHGHHPHHPHG---------------HPH 314

  Fly   460 HQQ-QSHHHQQQQQQQQQQQQLQQQQGFQHDFRNSGNGNPNGNSNSGDHGERLNADSDSLVNGSC 523
            |.. .:|||.                  ||...:.|:|.|
  Fly   315 HPHLGAHHHG------------------QHHLSHLGHGPP------------------------- 336

  Fly   524 ASSEDLNQTNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 588
                                            .|:.||:||.||..||.:||..|:|:|||||..
  Fly   337 --------------------------------PKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVL 369

  Fly   589 REELAMKVNLPEVRVQVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGAS 642
            ||:||:||:|.|.||:|||:|||||||:|::.|..||......|      ||::
  Fly   370 REQLALKVDLKEERVEVWFKNRRAKWRKQKREEQERLRKLQEEQ------CGST 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rx	NP_726006.3	Homeobox	563..615	CDD:278475	33/51 (65%)
		OAR	876..892	CDD:281777
Gsc	NP_001137762.2	Homeobox	343..396	CDD:278475	33/52 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24329
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	4.010