Protein Alignment Rx and al

DIOPT Version :10

• Sequence 1: NP_726006.3
• Gene: Rx / 37367
• FlyBaseID: FBgn0020617
• Length: 904
• Species: Drosophila melanogaster
• Sequence 2: NP_722629.1
• Gene: al / 33208
• FlyBaseID: FBgn0000061
• Length: 408
• Species: Drosophila melanogaster
• Alignment Length: 389
• Identity: 130/389 - (33%)
• Similarity: 178/389 - (45%)
• Gaps: 89/389 - (22%)

  Fly   532 TNSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKV 596
            |||     .::.|:.|...|:...|:|.||.|||||::||.|||:||.::|||||::|||||||:
  Fly    63 TNS-----PVSDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKI 122

  Fly   597 NLPEVRVQVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPWLSPPLLSALPGF 661
            .|.|.|:||||||||||||:|||                   .|....|.:|:        |||.
  Fly   123 GLTEARIQVWFQNRRAKWRKQEK-------------------VGPQSHPYNPY--------LPGG 160

  Fly   662 LSHPQTVYPSYLTP-PLSLAPGNLT-------MSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPP 718
            .:..|||..:.|.| |.:.....|.       .::|||..:.|....|..|   .|...|.|
  Fly   161 AATMQTVVGAALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIP---SGYFNQFQ--- 219

  Fly   719 PPPPHGVPHPHGSHHVVPLSHLSPHLSRMS--PHATSLGSPHHGVTP---LGTP-LHS-----SL 772
            ..|||.:||.....: .|.|.....|:.|:  |..|.||.|     |   :|:| |||     :.
  Fly   220 RAPPHMLPHGMAGMY-SPSSSFQSLLANMTAVPRGTPLGKP-----PALLVGSPDLHSPNHMLAS 278

  Fly   773 PPSSTATTVAVSSSQSSSSSASLECSGPDVCMSPQNLSIGNADSNGDGRDLSSDLDAGSTSSNPG 837
            ||:|.|:..|....|..::.       |....:|..:.:|...:     .||.....|...:...
  Fly   279 PPTSPASGHASQHQQHPTAH-------PPPPQAPPQMPVGVQPA-----QLSPQHLVGIALTQQA 331

  Fly   838 SSLD---------KCAASANIELLDVGRDSPPPPPTPTGKGSSTPPTDMRSNSIATLRIKAKEH 892
            |||.         ..:.|...:|......:|||||.     ::|||.|.|::|||.||:||:||
  Fly   332 SSLSPTQTSPVALTLSHSPQRQLPPPSHQAPPPPPR-----AATPPEDRRTSSIAALRLKAREH 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rx	NP_726006.3	Homeodomain	560..616	CDD:459649	40/55 (73%)
		OAR	876..892	CDD:461067	9/15 (60%)
al	NP_722629.1	Homeodomain	86..142	CDD:459649	40/55 (73%)
		OAR	374..391	CDD:461067	11/17 (65%)