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Protein Alignment Rx and ceh-54
DIOPT Version :9
Sequence 1: | NP_726006.3 |
Gene: | Rx / 37367 |
FlyBaseID: | FBgn0020617 |
Length: | 904 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001338798.1 |
Gene: | ceh-54 / 188474 |
WormBaseID: | WBGene00020485 |
Length: | 221 |
Species: | Caenorhabditis elegans |
Alignment Length: | 162 |
Identity: | 52/162 - (32%) |
Similarity: | 77/162 - (47%) |
Gaps: | 41/162 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 536 EQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPE 600
|..:||| ..:.:|....:.:|||.||...|:.|:|:.|.::.|||..|||:||.|:.|.|
Worm 27 ETTKKIT-----RKRSNNFNPDRKKRNRITFDANQIDEMEKVFAENQYPDTMSREKLANKIQLHE 86
Fly 601 VRVQVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPWLSPPLLSALPGFLSHP 665
.|||:||||||||:||::|. :|.|.:| |....:|
Worm 87 ERVQIWFQNRRAKYRREQKQ---------------------TGHPYEP----------PSITKNP 120
Fly 666 -----QTVYPSYLTPPLSLAPGNLTMSSLAAM 692
:|...:.||...|..|.||:..:|.::
Worm 121 TGEKEKTQDCTTLTSASSPGPSNLSNDTLVSI 152
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rx | NP_726006.3 |
Homeobox |
563..615 |
CDD:278475 |
29/51 (57%) |
OAR |
876..892 |
CDD:281777 |
|
ceh-54 | NP_001338798.1 |
Homeobox |
49..102 |
CDD:365835 |
29/52 (56%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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