DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rx and Gsc

DIOPT Version :10

Sequence 1:NP_726006.3 Gene:Rx / 37367 FlyBaseID:FBgn0020617 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_034481.1 Gene:Gsc / 14836 MGIID:95841 Length:256 Species:Mus musculus


Alignment Length:20 Identity:7/20 - (35%)
Similarity:10/20 - (50%) Gaps:4/20 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 TRHEPVG----VCGQIIPWN 184
            |.:|.:|    ||..:.|.|
Mouse    26 THYEMLGSCKMVCDSLTPTN 45

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RxNP_726006.3 Homeodomain 560..616 CDD:459649
OAR 876..892 CDD:461067
GscNP_034481.1 Homeodomain 161..217 CDD:459649
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..256
Blue background indicates that the domain is not in the aligned region.

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