DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rx and Phox2a

DIOPT Version :10

Sequence 1:NP_726006.3 Gene:Rx / 37367 FlyBaseID:FBgn0020617 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_032913.1 Gene:Phox2a / 11859 MGIID:106633 Length:280 Species:Mus musculus


Alignment Length:213 Identity:77/213 - (36%)
Similarity:99/213 - (46%) Gaps:79/213 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   556 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKS 620
            |:|.||.|||||:.||.||||.|.::||||:|:|||||:|::|.|.||||||||||||:|:||::
Mouse    87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERA 151

  Fly   621 ESLRLGLTHFTQLPHRLGCGASGL--------------------PVDPWLSPPLLSALPGFLSHP 665
            .|.:               ||:|.                    ...|  :|...::||      
Mouse   152 ASAK---------------GAAGATGAKKGEARCSSEDDDSKESTCSP--TPDSTASLP------ 193

  Fly   666 QTVYPSYLTPPL-SLAPGNLTMSSL-AAMGHHHAHNGPPPPHV-----------GHGGHG----- 712
                    .||. |||...|:.|.| ||:|     :||.|..:           |.||.|     
Mouse   194 --------PPPAPSLASPRLSPSPLPAALG-----SGPGPQPLKGALWAGVAGGGGGGPGTGAAE 245

  Fly   713 -----QPQPPPPPPPHGV 725
                 ||..|.|.|..||
Mouse   246 LLKAWQPAEPGPGPFSGV 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RxNP_726006.3 Homeodomain 560..616 CDD:459649 39/55 (71%)
OAR 876..892 CDD:461067
Phox2aNP_032913.1 Homeodomain 91..147 CDD:459649 39/55 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..244 29/134 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..280 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.

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