Protein Alignment Rx and alx4

DIOPT Version :9

• Sequence 1: NP_726006.3
• Gene: Rx / 37367
• FlyBaseID: FBgn0020617
• Length: 904
• Species: Drosophila melanogaster
• Sequence 2: XP_004913406.1
• Gene: alx4 / 100493396
• XenbaseID: XB-GENE-853003
• Length: 376
• Species: Xenopus tropicalis
• Alignment Length: 561
• Identity: 142/561 - (25%)
• Similarity: 188/561 - (33%)
• Gaps: 233/561 - (41%)

  Fly   361 PPPPGAYF------MESQTAPVAPSQINYDERSMSSASDLEEDDDDAAKLQLDVTSPPTPSPRGQ 419
            ||....|:      .|.||:|....|.:                        |..||...:.:||
 Frog    12 PPAMDCYYSPAPQGRELQTSPFRAFQPS------------------------DKFSPVFLASKGQ 52

  Fly   420 LAAKRKSAGVFCDDNEPKLANGQLPGGNYGIRPRSME--EVHH----QQQSHHHQQQQQQQQQQQ 478
             ....||.|.|..:.:...||.|   .|.|.:..|..  :.||    |||||.:.|....:....
 Frog    53 -GFGDKSRGSFQQECQSLDANVQ---SNSGEQQGSFTKYQAHHPSHQQQQSHLYMQSTPCKSPSD 113

  Fly   479 QLQQQQGFQHDFRNSGNGNPNGNSNSGDHGERLNADSDSLVNGSCASSEDLNQTNSSEQG----- 538
            .|:.|                            ::..|.|:  .|.:.|.....||..||
 Frog   114 SLKVQ----------------------------DSPGDPLI--PCYAKESALTPNSDHQGMDSGY 148

  Fly   539 ----EKITSGSDDEGQDD--------NCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREE 591
                |....||.|.|..|        ...|.|.||||||||:|||.|||:.|:|:||||||:||:
 Frog   149 ITSKETAGKGSQDRGSGDLPMDKTESESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQ 213

  Fly   592 LAMKVNLPEVRVQVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPWLSPPLLS 656
            |||:.:|.|.||||||||||||||::|:...::...|||:.
 Frog   214 LAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSS------------------------ 254

  Fly   657 ALPGFLSHPQTVYPSYLTPPLSLAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPPPPP 721
                          :|..|.|:.|.....:.:              |..:|:.|.|.|.|.
 Frog   255 --------------AYELPLLTRAENYAQIQN--------------PSWIGNNGGGSPVPA---- 287

  Fly   722 PHGVPHPHGSHHVVPLSHLSPHLSRMSPHATSLGSPHHGVTPLGTPLHSSLPPSSTATTVAVSSS 786
                       .|||...:|   |.||||:    .||
 Frog   288 -----------CVVPCDTVS---SCMSPHS----HPH---------------------------- 306

  Fly   787 QSSSSSASLECSGPDVCMSPQNLSIGNADSNGDGRDLSSDLDAGSTSSNPGSSLDKCAASANIEL 851
            .:...|..|...||       ...:|.....|         ..||.:..||.:
 Frog   307 SAGGVSEFLSVPGP-------GAHVGQTHMGG---------LFGSAAMGPGIN------------ 343

  Fly   852 LDVGRDSPPPPPTPTGKGSSTPPTDMRSNSIATLRIKAKEH 892
                           |...:|.| |.:|:|||.||:|||||
 Frog   344 ---------------GYDLNTEP-DRKSSSIAALRMKAKEH 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rx	NP_726006.3	Homeobox	563..615	CDD:278475	38/51 (75%)
		OAR	876..892	CDD:281777	10/15 (67%)
alx4	XP_004913406.1	COG5576	120..266	CDD:227863	67/185 (36%)
		Homeobox	185..238	CDD:365835	39/52 (75%)
		OAR	352..370	CDD:367680	12/17 (71%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	149	1.000	Inparanoid score	I4275
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D454642at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.970