Protein Alignment Rx and arxb

DIOPT Version :10

• Sequence 1: NP_726006.3
• Gene: Rx / 37367
• FlyBaseID: FBgn0020617
• Length: 904
• Species: Drosophila melanogaster
• Sequence 2: XP_002667096.1
• Gene: arxb / 100329907
• ZFINID: ZDB-GENE-121109-2
• Length: 385
• Species: Danio rerio
• Alignment Length: 420
• Identity: 120/420 - (28%)
• Similarity: 160/420 - (38%)
• Gaps: 174/420 - (41%)

  Fly   509 ERLNADSDSLVNGSCASS------------------EDLNQTNSSEQGEK-----------ITSG 544
            |:|.....|:||.|.|.|                  :...:||.:.:.|:           :::|
Zfish    86 EKLKITEASIVNISRAGSYQEHASCKNTPINEEEGADICGETNVTLKQEREAFLKNSEETSLSAG 150

  Fly   545 SDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQN 609
            ||.|   |...|:|.||.|||||:|||.||||||:|:|||||::||||||:::|.|.||||||||
Zfish   151 SDTE---DGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQN 212

  Fly   610 RRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPWLSPPLLSALPGFLSHPQTVYPSYLT 674
            ||||||::||     :|:.     ||.|....||       :||...:|..:||
Zfish   213 RRAKWRKREK-----VGVQ-----PHTLSLHYSG-------APPAAQSLCHYLS----------- 249

  Fly   675 PPLSLAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPPPPPPHGVPHPHGSHHVVPLSH 739
                                                 |.|..|.|.|......|      .|...
Zfish   250 -------------------------------------GNPFVPNPHPAIDSAWP------APFQR 271

  Fly   740 LS-PHLSRMSPHATS--LGSP--HHGV--TPLGTPLHSSLPPSSTATTVAVSSSQSSSSSASLEC 797
            |: |..:.:||...|  ||:.  .|..  .|....|.:||.|
Zfish   272 LAQPAQNSVSPPGFSALLGAAMFRHPAFFNPTFGRLFTSLGP----------------------- 313

  Fly   798 SGPDVCMSPQNLSIGNADSNGDGRDLSSDLDAGSTSSNPGSSLDKCAASANIELLDVGRDSPPPP 862
                  |:.|.:.:...    :|....|.|.....||                       |||.|
Zfish   314 ------MALQRIPLPAI----EGPIQRSHLTTSLLSS-----------------------SPPLP 345

  Fly   863 PTPTGKGSSTPPTDMRSNSIATLRIKAKEH 892
            .:||        .|:|::|||.||:|||||
Zfish   346 SSPT--------VDLRASSIAALRLKAKEH 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rx	NP_726006.3	Homeodomain	560..616	CDD:459649	43/55 (78%)
		OAR	876..892	CDD:461067	10/15 (67%)
arxb	XP_002667096.1	Homeodomain	163..219	CDD:459649	43/55 (78%)
		OAR	351..369	CDD:461067	12/17 (71%)