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Protein Alignment CAH15 and Car15

DIOPT Version :9

Sequence 1:	NP_611525.1	Gene:	CAH15 / 37366	FlyBaseID:	FBgn0034560	Length:	332	Species:	Drosophila melanogaster
Sequence 2:	NP_085035.1	Gene:	Car15 / 80733	MGIID:	1931324	Length:	324	Species:	Mus musculus

Alignment Length:	318	Identity:	84/318 - (26%)
Similarity:	130/318 - (40%)	Gaps:	58/318 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    29 LLKFILAIGVALLVLFNVYTGFSLANRCDEGSNDGCANAGGDNCRRLRGSPESYNYDWDQGPHTW 93
            ||.|:|               ..||.:.| .|...|.::....|                ||..|
Mouse     7 LLSFLL---------------IQLAAQVD-SSGTWCYDSQDPKC----------------GPAHW 39

  Fly    94 D---TACN--NQSPINIDMNCVEINYFDTPLIWSHYNSIPLG-IRLENNGHTLILRA-AFPERTP 151
            .   .||.  .|||||||:..|:.:|...|.|:..|:|.|.. ..|||:|||::||. :..:..|
Mouse    40 KELAPACGGPTQSPINIDLRLVQRDYTLKPFIFQGYDSAPQDPWVLENDGHTVLLRVNSCQQNCP 104

  Fly   152 SIDGGDLLG-RFDFREISFRWSWASSLGSEHTLDHHHSPLEMQCLHTD---GDGCDGCSSSQGVL 212
            :|.|..|.. .:...::.|.|......||||:||..|..:||..:|.:   ....|..|...|..
Mouse   105 AIRGAGLPSPEYRLLQLHFHWGSPGHQGSEHSLDEKHGSMEMHMVHMNTKYQSMEDARSQPDGFA 169

  Fly   213 MISYMF-DLSEHNPFLDVLIQHLAAVEQAGQVVEV-PPFPLSYLMSPFYD--KFYSYNGSLTEPP 273
            :::.:. :....|.....::..|..:...|..|.: ..|.|:.|:.....  ::|.|:||||.|.
Mouse   170 ILAVLLVEEDRDNTNFSAIVSGLKNLSSPGVAVNLTSTFALASLLPSALRLLRYYRYSGSLTTPG 234

  Fly   274 CHRGAEWLIYPESLAISERQLNEFRQ--------LRDRRGSRIARNARPVQPIGDRMV 323
            |.....|.::..::.|...|:.:|:.        |..|   .:..|.||.||:|.|.:
Mouse   235 CEPAVLWTVFENTVPIGHAQVVQFQAVLQTGPPGLHPR---PLTSNFRPQQPLGGRRI 289

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.