DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH15 and ca6

DIOPT Version :9

Sequence 1:NP_611525.1 Gene:CAH15 / 37366 FlyBaseID:FBgn0034560 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001072482.1 Gene:ca6 / 779937 XenbaseID:XB-GENE-494019 Length:121 Species:Xenopus tropicalis


Alignment Length:111 Identity:23/111 - (20%)
Similarity:44/111 - (39%) Gaps:22/111 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 EISFRWSWASS--LGSEHTLDHHHSPLEMQCLH-------TDGDGCDGCSSSQGVLMISYMFDLS 221
            ::...|....|  .|||||:|......|:..:|       |..:..|   ...|:.::::::...
 Frog    15 QMHLHWGGLESETSGSEHTIDGMRYLAELHVVHYNSGTYKTFDEAKD---KPNGLAVLAFLYTTG 76

  Fly   222 EH-NPFLDVLIQHLAAVEQAGQVVEVPPFPLSYLMSPFYDKFYSYN 266
            .: |.:....|..|:.:..|   |..||.|      ..:|..::|:
 Frog    77 NYENTYYSDFISKLSKIRYA---VICPPRP------SLFDHVFAYS 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH15NP_611525.1 alpha_CARP_receptor_like 82..325 CDD:239396 23/111 (21%)
ca6NP_001072482.1 alpha_CA <1..>96 CDD:320708 16/83 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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