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Protein Alignment CAH15 and Car13

DIOPT Version :9

Sequence 1:	NP_611525.1	Gene:	CAH15 / 37366	FlyBaseID:	FBgn0034560	Length:	332	Species:	Drosophila melanogaster
Sequence 2:	NP_078771.1	Gene:	Car13 / 71934	MGIID:	1931322	Length:	262	Species:	Mus musculus

Alignment Length:	270	Identity:	73/270 - (27%)
Similarity:	115/270 - (42%)	Gaps:	34/270 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    81 SYNYDWDQGPHTWDTAC-----NNQSPINIDMNCVEINYFDTPLIWSHYNSIPLGIR-------- 132
            |:.|....||..|:...     :.||||.|...  |:.| |:.|       .||.|:
Mouse     5 SWGYGEHNGPIHWNELFPIADGDQQSPIEIKTK--EVKY-DSSL-------RPLSIKYDPASAKI 59

  Fly   133 LENNGHTLILRAAFPERTPSIDGGDLLGRFDFREISFRWSWASSLGSEHTLDHHHSPLEMQCLHT 197
            :.|:||:..:.....|....:.||.|.|.:..|:....|..|...||||.:|......|:..:|.
Mouse    60 ISNSGHSFNVDFDDTEDKSVLRGGPLTGNYRLRQFHLHWGSADDHGSEHVVDGVRYAAELHVVHW 124

  Fly   198 DGDG----CDGCSSSQGVLMISYMFDLSEHNPFLDVLIQHLAAVEQAGQVVEVPPF-PLSYLMSP 257
            :.|.    .:....|.|:.::.....:.||||.|..:...|.::::.|:......| ||..|.|.
Mouse   125 NSDKYPSFVEAAHESDGLAVLGVFLQIGEHNPQLQKITDILDSIKEKGKQTRFTNFDPLCLLPSS 189

  Fly   258 FYDKFYSYNGSLTEPPCHRGAEWLIYPESLAISERQLNEFRQL----RDRRGSRIARNARPVQPI 318
            :  .:::|.||||.||......|::..:.::||.:||..||.|    .....:.:..|.||.||:
Mouse   190 W--DYWTYPGSLTVPPLLESVTWIVLKQPISISSQQLARFRSLLCTAEGESAAFLLSNHRPPQPL 252

  Fly   319 GDRMVYLNRY 328
            ..|.|..:.|
Mouse   253 KGRRVRASFY 262

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.