DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH15 and ca15a

DIOPT Version :10

Sequence 1:NP_611525.1 Gene:CAH15 / 37366 FlyBaseID:FBgn0034560 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001075158.1 Gene:ca15a / 553469 ZFINID:ZDB-GENE-070424-7 Length:324 Species:Danio rerio


Alignment Length:293 Identity:65/293 - (22%)
Similarity:115/293 - (39%) Gaps:96/293 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 WDQ-GPHTWDTACN--NQSPINI-------DMNCVEINY--FDTPLIWSHYNSIPLGIRLENNGH 138
            |.: .||    .||  :||||||       :.|..:.|:  ||....:         |.:.|:|.
Zfish    38 WPELSPH----YCNGSSQSPINIVTAQVLENSNLTQFNFTGFDANTTF---------ISMANSGI 89

  Fly   139 TLILRAAFPERTPSIDGGDLLGRFDFREISFRWSWASSL-GSEHTLDHHHSPLEMQCLHTDG--- 199
            ::::  ...|...|:.||||.|.:..::....|..:||. |||||:|.....:|:..::...   
Zfish    90 SVVV--TLDEEIMSVQGGDLPGLYVSKQFHLHWGNSSSFPGSEHTVDGKQYAMELHIVNVHSKYN 152

  Fly   200 ----------------------DGCDGCSSSQG-VLMISYMFDLS-EHNPFLDVLIQH-----LA 235
                                  :|.:..|.::| .::.|::.::: ..|..:|::.:.     |.
Zfish   153 GSLSAALAANDSSALAVLGFFIEGTNEASKAKGWGVLTSFLRNITYSGNATVDIMNRTSMNSLLE 217

  Fly   236 AVEQAGQVVEVPPFPLSYLMSPFYDKFYSYNGSLTEPPCHRGAEWLIYPESLAISERQLNEFRQL 300
            .|.:.                    |:|.|.||||.|.|:....|.::.|.:.::...:|.|.. 
Zfish   218 GVNKT--------------------KYYRYRGSLTTPSCNEAVIWTVFKEPIKVNNNLINLFST- 261

  Fly   301 RDRRGSRIARNA----------RPVQPIGDRMV 323
                 :..|:||          |.|||:..|:|
Zfish   262 -----TVFAKNASAPVLNVNNFRGVQPLNGRVV 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH15NP_611525.1 alpha_CARP_receptor_like 82..325 CDD:239396 65/293 (22%)
ca15aNP_001075158.1 alpha_CA_IV_XV_like 48..291 CDD:239391 60/279 (22%)

Return to query results.
Submit another query.