DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH15 and ca4b

DIOPT Version :9

Sequence 1:NP_611525.1 Gene:CAH15 / 37366 FlyBaseID:FBgn0034560 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001159683.1 Gene:ca4b / 553246 ZFINID:ZDB-GENE-080815-5 Length:304 Species:Danio rerio


Alignment Length:339 Identity:90/339 - (26%)
Similarity:135/339 - (39%) Gaps:80/339 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LNYLWCSLEDISCRLQDSNLLKFILAIGVALLVLFNVYTGFSLANRCDEG----SNDGCANAGGD 70
            :|:|..|...|.|||..|                         |..|.:.    ||..|.     
Zfish     1 MNFLCLSTLAILCRLASS-------------------------AEWCYQTQVTCSNHSCI----- 35

  Fly    71 NCRRLRGSPESYNYDWDQGPHTWDT---AC--NNQSPINIDMNCVEINYFDTPLIWSHYNSIPLG 130
                              ||..|.|   ||  |.||||||..|....:...||:.::.|.. .|.
Zfish    36 ------------------GPDDWATVAAACGNNKQSPINIVTNKASTDSRLTPVQFTDYQE-RLN 81

  Fly   131 IRLENNGHTLILRAAFPERTPSIDGGDLLGRFDFREISFRWSWASSLGSEHTLDHHHSPLEMQCL 195
            ..:.|||||:.:.  .|:|. .|:|.:|...:..:::...|......|||||:|....|:|:..:
Zfish    82 AVIVNNGHTVQIN--LPDRA-KINGANLGSTYKAQQLHLHWGKNGGPGSEHTIDGEKFPMELHVV 143

  Fly   196 HTD----------GDGCDGCSSSQGVLMISYMFDLSEH-NPFLDVLIQHLAAVEQAGQVVEVPPF 249
            |..          ||       |.||.::.:.::.||: |...|.:|..|..:.......|:...
Zfish   144 HIKEEYNSLEQAVGD-------SSGVAVLGFFYEESENANKNYDAIINSLTNITHPESNAELGAI 201

  Fly   250 PLSYLM-SPFYDKFYSYNGSLTEPPCHRGAEWLIYPESLAISERQLNEFRQLRDRRGSRIARNAR 313
            .|..|: :...||::.|.||||.|.|.....|.|:.:::.:|:.||:.|..|....|:.:....|
Zfish   202 SLDMLIPNEDLDKYFRYEGSLTTPGCAEAVVWTIFEKTIPLSKEQLSAFSNLTFSDGAAMVNTFR 266

  Fly   314 PVQPIGDRMVYLNR 327
            |:|...||.||.:|
Zfish   267 PIQLRFDRPVYYSR 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH15NP_611525.1 alpha_CARP_receptor_like 82..325 CDD:239396 75/259 (29%)
ca4bNP_001159683.1 alpha_CA_IV_XV_like 50..278 CDD:239391 69/238 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579127
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18952
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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