DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH15 and ca7

DIOPT Version :9

Sequence 1:NP_611525.1 Gene:CAH15 / 37366 FlyBaseID:FBgn0034560 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001015903.1 Gene:ca7 / 548657 XenbaseID:XB-GENE-1017206 Length:266 Species:Xenopus tropicalis


Alignment Length:273 Identity:73/273 - (26%)
Similarity:119/273 - (43%) Gaps:33/273 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 GDNCRRLRGSPESYNYDWDQGPHTWD-----TACNNQSPINIDMNCVEINYFDTPLI--WSHYNS 126
            |.:|         :.|..:.||..|.     ...|.||||:|..|....|....||:  :.|..|
 Frog     3 GQHC---------WGYGEEDGPSEWHHYFPIAEGNRQSPIDIVSNQAVFNPSLNPLVISYDHCTS 58

  Fly   127 IPLGIRLENNGHTLILRAAFPERTPSIDGGDLLGRFDFREISFRWSWASSLGSEHTLDHHHSPLE 191
                |.|.||||::::.....:....|.||.|.|.:..::..|.|....:.|||||:|....|.|
 Frog    59 ----INLSNNGHSVMVEFDDYDDKTVITGGPLEGSYRLKQFHFHWGTQRNSGSEHTVDGKSYPCE 119

  Fly   192 MQCLHTDGDGC----DGCSSSQGVLMISYMFDLSEHNPFLDVLIQHLAAVEQAGQVVEVPPF-PL 251
            :..:|.:....    :..::..|:::|....:....:..|:.|...|..|:..|...:...| |.
 Frog   120 LHLVHWNARAYSSFGEAAAAPDGLVVIGVFLETGGQHSGLNRLTDALYMVKFKGTKTQFDDFNPK 184

  Fly   252 SYLMSPFYDKFYSYNGSLTEPPCHRGAEWLIYPESLAISERQLNEFRQL------RDRRGSRIAR 310
            ..|.|.|  ::::|.||||.||.:....|::..|.:.:||:|:..||:.      .:.:...:..
 Frog   185 CLLPSSF--EYWTYPGSLTTPPLNESVTWIVLKEPIKVSEKQMERFRKTLLFSGEEEEQRIHMVN 247

  Fly   311 NARPVQPIGDRMV 323
            |.||.||:..|.|
 Frog   248 NFRPPQPLKGRKV 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH15NP_611525.1 alpha_CARP_receptor_like 82..325 CDD:239396 71/260 (27%)
ca7NP_001015903.1 alpha_CA_VII 27..264 CDD:239402 67/240 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.