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Protein Alignment CAH15 and Car6

DIOPT Version :9

Sequence 1:	NP_611525.1	Gene:	CAH15 / 37366	FlyBaseID:	FBgn0034560	Length:	332	Species:	Drosophila melanogaster
Sequence 2:	NP_033932.2	Gene:	Car6 / 12353	MGIID:	1333786	Length:	317	Species:	Mus musculus

Alignment Length:	265	Identity:	68/265 - (25%)
Similarity:	113/265 - (42%)	Gaps:	29/265 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    81 SYNYDWDQGPHTWD---TAC--NNQSPINIDMNCVEINYFDTPLIWSHYNSIPLGIRLENNGHTL 140
            ||:.|...|...|.   .:|  ..||||::....|..|....||...:|....|...:.|||||:
Mouse    22 SYSGDDGVGESQWSEQYPSCGGERQSPIDVKTEEVMFNPSLKPLSLVNYEKENLEFTMTNNGHTV 86

  Fly   141 ILRAAFPERTPSI-----DGGDLLGRFDFREISFRW---SWASSLGSEHTLDHHHSPLEMQCLHT 197
            .:     :..||:     ||.:.:.    :...|.|   .|..| |||||:|...|.:|...:|.
Mouse    87 SI-----DLPPSMYLETSDGTEFIS----KAFHFHWGGRDWELS-GSEHTIDGIRSIMEAHFVHF 141

  Fly   198 D---GDGCDGCSSSQGVLMISYMFDLSEH--NPFLDVLIQHLAAVEQAGQVVEVPPFPLSYLMSP 257
            :   |...:......|:.:::.:|.:.|:  |.:...:|..|..:|:.|:...:....:..|:..
Mouse   142 NKEYGTYENAKDQKNGLAVLAVLFKIDEYAENTYYSDIISALKNIEKPGETTTLKDTTIRNLLPK 206

  Fly   258 FYDKFYSYNGSLTEPPCHRGAEWLIYPESLAISERQLNEF-RQLRDRRGSRIARNARPVQPIGDR 321
            ....:|:|.||||.|||....:|.:..:.:.:|:.|:... ..:.|...:.|....|..||...|
Mouse   207 DVHHYYTYPGSLTTPPCTENVQWFVLRDKVTLSKAQVVTIENSVMDHNNNTIQNGYRSTQPNNHR 271

  Fly   322 MVYLN 326
            :|..|
Mouse   272 VVEAN 276

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.